Basic Information
Locus ID:
AH01.2581
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 36275392 | 36279422 | + | AH01.2581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 66,490.68 Da | 39.60 | 84.70 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 335 | 369 | 7.14355E-8 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 42 | 73 | 9.0E-10 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 446 | 542 | 8.9E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 440 | 542 | 2.28E-24 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 334 | 371 | 2.12E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 544 | 9.0E-26 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 294 | 337 | 1.0E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 338 | 378 | 3.1E-10 | - |
| SMART | SM00179 | egfca_6 | 335 | 376 | 2.6E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 285 | 334 | 110.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 338 | 376 | 0.02 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 442 | 602 | 13.460528 | IPR000719 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 335 | 360 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 448 | 470 | - | IPR017441 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 351 | 362 | - | IPR000152 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 1.58E-61 |
| RefSeq | XP_008678279.1 | wall-associated receptor kinase 1 [Zea mays] | 3.09E-176 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 1.55E-60 | |
| TrEMBL | A0A5J9VVF4 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_13876 PE=4 SV=1 | 3.06E-280 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology