HalophFGD

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Basic Information
Locus ID: AH01.2564
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH01 35562021 35563383 + AH01.2564
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.82 23,559.46 Da 67.77 63.46 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 53 88 - -
MobiDBLite mobidb-lite consensus disorder prediction 197 217 - -
MobiDBLite mobidb-lite consensus disorder prediction 60 88 - -
Best hit
Source Best Hit ID Description E-value
TrEMBL A2YVY0 Programmed cell death protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29486 PE=4 SV=1 2.52E-6
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 52 AH01.1849, AH01.2108, AH01.2253, AH01.2254, AH01.2344 ...
AH01.2378, AH01.2387, AH01.2416, AH01.2564, AH01.3388, AH02.1713, AH02.2396, AH02.2605, AH02.2618, AH02.3235, AH02.411, AH03.1233, AH03.1359, AH03.1713, AH03.1714, AH03.600, AH04.1389, AH04.653, AH05.1409, AH05.2307, AH05.2563, AH05.2591, AH05.2985, AH05.3200, AH05.3322, AH06.1373, AH06.1385, AH06.1398, AH06.1490, AH06.1885, AH06.1894, AH06.2676, AH06.626, AH06.866, AH06.893, AH07.1533, AH07.1631, AH08.388, AH08.937, AH08.938, AH09.179, AH09.2447, AH09.2817, BH05.3149, CH02.1981, CH02.678, CH05.2725
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.