Basic Information
Locus ID:
AH01.2184
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 24278195 | 24280448 | + | AH01.2184 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 38,678.40 Da | 41.11 | 63.75 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 305 | 337 | 4.15431E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 85 | 6.9E-9 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 305 | 341 | 1.26E-7 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 246 | 354 | 5.3E-11 | - |
| SMART | SM00179 | egfca_6 | 305 | 349 | 5.3E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 255 | 304 | 1.3 | IPR000742 |
| SMART | SM00181 | egf_5 | 308 | 349 | 0.13 | IPR000742 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 305 | 342 | 8.925509 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 305 | 330 | - | IPR018097 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 321 | 332 | - | IPR000152 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 4.65E-37 |
| RefSeq | XP_039805522.1 | wall-associated receptor kinase 2-like [Panicum virgatum] | 3.63E-209 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 4.61E-36 | |
| TrEMBL | A0A8T0W6R0 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2KG226300 PE=4 SV=1 | 8.22E-208 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology