Basic Information
Locus ID:
AH01.2177
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
CHASE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 24147085 | 24150639 | - | AH01.2177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.32 | 72,980.14 Da | 51.05 | 66.35 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 508 | 621 | 1.3E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 502 | 650 | 2.52E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 499 | 634 | 3.6E-27 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 67 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 2.01E-23 |
| RefSeq | XP_025799967.1 | probable kinase CHARK [Panicum hallii] | 1.98E-88 |
| Q2QRN7 | Probable kinase CHARK OS=Oryza sativa subsp. japonica OX=39947 GN=CHARK PE=2 SV=1 | 1.04E-61 | |
| TrEMBL | A0A3L6QTB1 | Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G07370 PE=4 SV=1 | 3.24E-95 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||