Basic Information
Locus ID:
AH01.1972
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sugar (and other) transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 20208891 | 20212907 | - | AH01.1972 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 70,763.05 Da | 50.64 | 96.01 | 0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 212 | 639 | 4.9E-39 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 155 | 638 | 9.02E-67 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 173 | 644 | 4.7E-82 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 180 | 632 | 40.812542 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 508 | 523 | - | IPR005829 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 119 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 1.28E-212 |
| RefSeq | XP_004983024.1 | organic cation/carnitine transporter 7 isoform X1 [Setaria italica] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 1.23E-211 | |
| TrEMBL | K4A922 | MFS domain-containing protein OS=Setaria italica OX=4555 GN=101753916 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology