HalophFGD

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Basic Information
Locus ID: AH01.1848
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Phloem protein 2
Maps and Mapping Data
Chromosome Start End Strand ID
AH01 17922731 17926800 - AH01.1848
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.81 17,667.24 Da 50.40 86.28 0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14299 Phloem protein 2 45 153 4.4E-7 IPR025886
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025792694.1 F-box protein PP2-B11-like [Panicum hallii] 2.86E-24
TrEMBL A0A2T7C6C1 F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G223500 PE=4 SV=1 6.14E-23
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH01.1848, AH01.3671, BH01.4023, BH08.313, CH01.2257 ...
CH01.4294, CH08.390
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_8AG0617210, gene-QOZ80_8BG0644830
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.3HG0231520.1, HORVU.MOREX.r3.7HG0701150.1 ...
HORVU.MOREX.r3.7HG0714530.1
Poaceae Lolium multiflorum 2 gene-QYE76_032497, gene-QYE76_032531
Poaceae Oryza coarctata 2 Oco15G001980, Oco16G002040
Poaceae Oryza sativa 1 LOC_Os08g05480.1
Poaceae Paspalum vaginatum 3 gene-BS78_07G043700, gene-BS78_07G082500 ...
gene-BS78_07G082600
Poaceae Puccinellia tenuiflora 3 Pt_Chr0405591, Pt_Chr0405592, Pt_Chr0405593
Poaceae Sporobolus alterniflorus 7 Chr16G001100, Chr16G001190, Chr17G001130, Chr20G010660 ...
Chr20G010680, Chr29G011680, Chr29G011700
Poaceae Thinopyrum elongatum 3 Tel3E01G144300, Tel7E01G524700, Tel7E01G604000
Poaceae Triticum dicoccoides 5 gene_TRIDC3AG009440, gene_TRIDC3BG013290 ...
gene_TRIDC7AG042560, gene_TRIDC7AG051800, gene_TRIDC7BG033690
Poaceae Triticum aestivum 8 TraesCS3A02G079300.1, TraesCS3B02G094500.1 ...
TraesCS3D02G079700.1, TraesCS7A02G304800.1, TraesCS7A02G371000.1, TraesCS7B02G205100.1, TraesCS7D02G300300.1, TraesCS7D02G351500.1
Poaceae Zea mays 2 Zm00001eb046560_P001, Zm00001eb416330_P002
Poaceae Zoysia japonica 3 nbis-gene-41564, nbis-gene-41565, nbis-gene-41580
Poaceae Zoysia macrostachya 3 Zma_g23606, Zma_g23607, Zma_g23615
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.