Basic Information
Locus ID:
AH01.1704
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 15702224 | 15705503 | - | AH01.1704 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 31,329.25 Da | 50.72 | 77.11 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 177 | 284 | 4.5E-16 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 90 | 285 | 2.3E-72 | - |
| SMART | SM00702 | p4hc | 97 | 289 | 2.5E-53 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 173 | 291 | 9.606777 | IPR005123 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 83 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 7.52E-123 |
| RefSeq | XP_025797707.1 | probable prolyl 4-hydroxylase 3 [Panicum hallii] | 1.98E-162 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 7.23E-122 | |
| TrEMBL | A0A2S3IL39 | Fe2OG dioxygenase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_9G202200 PE=4 SV=1 | 4.47E-161 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology