HalophFGD

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Basic Information
Locus ID: AH01.1551
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH01 14191665 14192531 + AH01.1551
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.12 31,416.31 Da 59.53 83.65 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 6 46 5.0E-8 IPR001810
SUPERFAMILY SSF81383 F-box domain 7 73 8.24E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 80 3.6E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_014758656.1 uncharacterized protein LOC100831682 [Brachypodium distachyon] 6.7E-19
TrEMBL K4AM59 F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 2.4E-80
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH01.1551, AH01.1552, AH03.266, CH01.1829, CH01.1830
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.