Basic Information
Locus ID:
AH01.1406
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
dUTPase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 12589518 | 12590210 | - | AH01.1406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 16,751.03 Da | 22.41 | 104.15 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07557 | trimeric_dUTPase | 47 | 135 | 5.57611E-33 | IPR033704 |
| Pfam | PF00692 | dUTPase | 35 | 163 | 7.2E-44 | IPR029054 |
| SUPERFAMILY | SSF51283 | dUTPase-like | 26 | 164 | 4.32E-47 | IPR036157 |
| Gene3D | G3DSA:2.70.40.10 | - | 16 | 164 | 1.5E-57 | IPR036157 |
| TIGRFAM | TIGR00576 | dut: dUTP diphosphatase | 27 | 163 | 1.5E-53 | IPR008181 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46940.1 | DUTP-PYROPHOSPHATASE-LIKE 1. | 4.02E-76 |
| RefSeq | XP_012698012.1 | deoxyuridine 5'-triphosphate nucleotidohydrolase [Setaria italica] | 1.04E-104 |
| Q10FF9 | Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Oryza sativa subsp. japonica OX=39947 GN=DUT PE=3 SV=1 | 7.24E-95 | |
| TrEMBL | K4AF06 | Deoxyuridine 5'-triphosphate nucleotidohydrolase OS=Setaria italica OX=4555 GN=SETIT_9G145300v2 PE=3 SV=1 | 1.37E-102 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg11888, jg6308, jg675 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15111 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah004671, Ah008657 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g108170 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg24323, Sbi_jg8156 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11863 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001736 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl52461, Sgl52517, Sgl57751 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000005768, gene:ENSEOMG00000022201 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.5BG0001100 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30046350 |
| Apiaceae | Apium graveolens | 1 | Ag10G02484 |
| Arecaceae | Cocos nucifera | 2 | COCNU_03G002660, COCNU_06G019160 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103702703, gene-LOC103702704 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G46940.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011147m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g14800.v2.2 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1609 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G1735 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno06g01380 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0066s00022.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 13 | gene.Thate01g08870, gene.Thate01g20710, gene.Thate01g23280 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1318 |
| Nitrariaceae | Nitraria sibirica | 3 | evm.TU.LG02.2315, evm.TU.LG06.562, evm.TU.LG06.563 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00007310 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G34809 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.1406, BH01.1243, CH01.1287 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0222340, gene-QOZ80_3BG0267430 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0234080.1, HORVU.MOREX.r3.4HG0333750.1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_063186 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g46640.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G131100 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr12G028640 |
| Poaceae | Thinopyrum elongatum | 4 | Tel4E01G042500, Tel5E01G035200, Tel7E01G727900 ... |
| Poaceae | Triticum dicoccoides | 21 | gene_TRIDC1AG020100, gene_TRIDC1AG058070 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS1A02G090500.1, TraesCS1B02G469900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb052270_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-20583 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g3116 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.2921, evm.TU.LG16.693 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc01g12500, gene.Posoc03g26400, gene.Posoc03g26420 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_7_RagTag.572 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19059 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-13396 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13996 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.553 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5868 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12502 |
| Salicaceae | Populus euphratica | 3 | populus_peu07983, populus_peu14231, populus_peu30722 |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132608707, gene-LOC132628007, gene-LOC132645236 ... |
| Solanaceae | Solanum chilense | 3 | SOLCI000857100, SOLCI001544800, SOLCI006483600 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107010612, gene-LOC107012767, gene-LOC107016371 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.30915_chr11_-, gene_1727 |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G2234 |
| Zosteraceae | Zostera marina | 1 | Zosma03g15860.v3.1 |