Basic Information
Locus ID:
AH01.1314
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 11808396 | 11809628 | - | AH01.1314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 44,615.79 Da | 45.27 | 75.27 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 77 | 374 | 1.9E-57 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 377 | 4.05E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 172 | 402 | 1.9E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 171 | 5.8E-15 | - |
| SMART | SM00220 | serkin_6 | 77 | 374 | 4.6E-76 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 374 | 43.523544 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 83 | 106 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 205 | 217 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 61 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 7.48E-51 |
| RefSeq | XP_039783200.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 2.46E-188 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.94E-72 | |
| TrEMBL | A0A8T0NJX2 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG087400 PE=3 SV=1 | 5.56E-187 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology