Basic Information
Locus ID:
AH01.1303
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 11694426 | 11700356 | + | AH01.1303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 96,883.93 Da | 62.66 | 77.63 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 578 | 875 | 2.2E-61 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 877 | 1.35E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 554 | 657 | 5.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 658 | 882 | 2.7E-57 | - |
| SMART | SM00220 | serkin_6 | 578 | 875 | 7.3E-82 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 578 | 875 | 45.558842 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 584 | 607 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 706 | 718 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 506 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63370.2 | Protein kinase superfamily protein. | 1.18E-50 |
| RefSeq | XP_004982275.2 | putative cyclin-dependent kinase F-2, partial [Setaria italica] | 4.06E-209 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 2.75E-74 | |
| TrEMBL | A0A1E5WBR7 | Putative cyclin-dependent kinase F-2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0004114 PE=3 SV=1 | 1.03E-199 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology