Basic Information
Locus ID:
AH01.1252
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 11149976 | 11152880 | + | AH01.1252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.45 | 28,612.84 Da | 73.03 | 85.08 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 65 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044957582.1 | uncharacterized protein LOC123408571 [Hordeum vulgare subsp. vulgare] | 1.69E-15 |
| TrEMBL | A0A3L6S8K0 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G06760 PE=4 SV=1 | 3.61E-34 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 22 | AH01.1249, AH01.1251, AH01.1252, AH01.2719, AH01.2720 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0118890, gene-QOZ80_2BG0164750 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.7HG0751830.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 22 | gene-QYE76_001111, gene-QYE76_001112, gene-QYE76_001114 ... |
| Poaceae | Paspalum vaginatum | 11 | gene-BS78_01G071300, gene-BS78_01G145300, gene-BS78_K058100 ... |
| Poaceae | Puccinellia tenuiflora | 10 | Pt_Chr0100012, Pt_Chr0100530, Pt_Chr0207346, Pt_Chr0500031 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr12G027540 |
| Poaceae | Triticum aestivum | 7 | TraesCS4A02G249900.1.cds1, TraesCS4B02G064800.1.cds1 ... |