Basic Information
Locus ID:
AH01.1228
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH01 | 10885863 | 10889358 | + | AH01.1228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 41,656.23 Da | 28.63 | 80.27 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 77 | 349 | 5.72832E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 72 | 349 | 6.8E-60 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 349 | 9.57E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 152 | 5.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 358 | 1.0E-60 | - |
| SMART | SM00220 | serkin_6 | 71 | 352 | 1.4E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 71 | 352 | 41.304508 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 210 | 228 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 320 | 342 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 276 | 298 | 2.3E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 172 | 185 | 2.3E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 4.1E-209 |
| RefSeq | XP_004982354.1 | serine/threonine-protein kinase HT1 [Setaria italica] | 3.04E-281 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 1.88E-181 | |
| TrEMBL | K4ABD4 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101762013 PE=4 SV=1 | 6.89E-280 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology