Gene ID Homology gene Gene ID (homology) Species PMID Description evm.TU.LG01.1233 ZmMYB3R XM_008674770.4 Zea mays 30798172 Overexpression increased salt tolerance (positive). evm.TU.LG06.401 ZmSCE1e XM_008670775.2 Zea mays 30824044 Overexpression improved salt tolerance (SUMO-conjugating enzyme; positive). evm.TU.LG12.995 MbNAC25 NM_001294041.1 Malus baccata 32054040 Overexpression enhanced salt tolerance (positive). evm.TU.LG03.2264 SlGME1 NM_001247805.2 Solanum lycopersicum 20981454 Overexpression enhanced salt tolerance via elevated ascorbate (GDP-mannose 3,5-epimerase; positive). evm.TU.LG12.1311 LeNHX2 NM_001328634.1 Solanum lycopersicum 23550888 Tomato LeNHX2 overexpression increased salt tolerance (better growth/ion homeostasis). evm.TU.LG10.1451 SlMDHAR NM_001247084.2 Solanum lycopersium 32900447 Overexpression enhanced salt tolerance (MDHAR; positive). evm.TU.LG05.572 SlICE1a NM_001287789.1 tomato 24184451 Overexpression enhanced salt tolerance (ICE1 homolog; positive). evm.TU.LG11.1243 PR10a NM_001288085.1 Solanum tuberosum 23455709 Overexpression enhanced salt tolerance (positive). evm.TU.LG08.458 PtHMGR XM_002316990.2 Populus trichocarpa 31574532 Overexpression increased salt tolerance (isoprenoid pathway; positive). evm.TU.LG10.1034 AtNDPK2 NM_125726.4 Arabidopsis 25240265 NDPK2 positively contributes to salt tolerance; mutants more sensitive (positive). evm.TU.LG05.527 AtIpk2beta NM_125570.4 Arabidopsis thaliana 18165921 Overexpression increased salt tolerance via inositol phosphate signaling (positive). evm.TU.LG05.1983 mTERF9 NM_124940.4 Arabidopsis 31850621 mTERF5 acts as a negative regulator; loss-of-function increased salt tolerance. evm.TU.LG03.2273 CsPNG1 NM_124335.3 Cucumis sativus 32142987 Overexpression increased salt tolerance (peptide:N-glycanase; positive). evm.TU.LG11.896 bHLH92 NM_123731.5 Arabidopsis thaliana 19760256 Overexpression increased salt tolerance (bHLH TF; positive). evm.TU.LG02.2420 AtTrx-h3 NM_123664.4 Arabidopsis 31901883 Overexpression increased salt tolerance; AtTrx-h2 functions in abiotic stress responses. evm.TU.LG06.601 AtDFR NM_123645.4 Arabidopsis 28444442 Overexpression increased salt tolerance via anthocyanin/ROS control (positive). evm.TU.LG02.142 AtTrx-h2 NM_123358.4 Arabidopsis 31901883 Overexpression increased salt tolerance; AtTrx-h2 functions in abiotic stress responses. evm.TU.LG03.2346 AtACP5 NM_122602.2 Arabidopsis 28642782 Purple acid phosphatase; overexpression increased, and loss-of-function decreased, salt tolerance in Arabidopsis (positive). evm.TU.LG05.1113 SOS3 NM_122333.6 Arabidopsis thaliana 14742879 Loss-of-function is salt hypersensitive; key positive regulator of salt tolerance via SOS pathway. evm.TU.LG03.150 AnnAt8 NM_121276.3 Arabidopsis 27135239 Overexpression improved salt tolerance (annexin; positive). evm.TU.LG01.1985 S-RBP11 NM_120703.3 Arabidopsis 24413693 Overexpression enhanced salt tolerance (RNA-binding protein; positive regulator). evm.TU.LG02.1699 AtEXP2 NM_120611.3 Arabidopsis 24404203 Overexpression improved germination/seedling vigor under salt (positive). evm.TU.LG01.1443 EIN2 NM_120406.5 Arabidopsis thaliana 17533512 Loss-of-function mutants are salt-sensitive; functional EIN2 supports tolerance (positive role). evm.TU.LG07.1571 AtCOL4 NM_122402.3 Arabidopsis 25073793 Overexpression enhanced salt/ABA responses (positive regulator of salt tolerance). evm.TU.LG02.684 AtPLAT1 NM_120134.3 Arabidopsis 25757741 Overexpression increased salt tolerance (PLAT domain protein; positive). evm.TU.LG02.2103 DEAR4 NM_119854.3 Arabidopsis 32296455 Overexpression reduced salt tolerance (lower germination/seedling survival under NaCl); DEAR4 acts as a negative regulator of salt tolerance. evm.TU.LG08.434 AtGluR2 NM_001342335.1 Arabidopsis thaliana 11158446 Overexpression of AtGluR2 renders transgenic plants hypersensitive to K+ and Na+ salt (negative). evm.TU.LG06.887 Ath-ALDH3 NM_119588.6 Arabidopsis thaliana 12904208 Overexpression improved salt/oxidative stress tolerance (positive). evm.TU.LG08.526 PGDH1 NM_119583.4 Arabidopsis 31779918 Overexpression increased salt tolerance via serine biosynthesis/ROS homeostasis (positive). evm.TU.LG07.1206 SES1 NM_119097.4 Arabidopsis thaliana 30287478 ER-localized chaperone; mutants salt-sensitive; SES1 positively contributes to salt tolerance. evm.TU.LG07.1202 AtACS7 NM_118753.3 Arabidopsis thaliana 15699063 Stress-inducible promoter activity under salt; no direct tolerance phenotype tested in this paper. evm.TU.LG12.769 HSFA4A NM_118004.3 Arabidopsis thaliana 24676858 Overexpression improved salt tolerance via ROS management (positive). evm.TU.LG02.742 mTERF5 NM_117541.9 Arabidopsis 31850621 mTERF5 acts as a negative regulator; loss-of-function increased salt tolerance. evm.TU.LG06.1081 AtPTPA NM_116965.3 Arabidopsis thaliana 25281708 Reduced expression of AtPTPA leads to severe defects in plant development, altered responses to abscisic acid, ethylene, and sodium chloride, and decreased PP2A activity. evm.TU.LG04.1177 AtHAG1 NM_115318.3 Arabidopsis 30394596 GCN5/Histone acetyltransferase; required for salt tolerance; mutants sensitive (positive contributor). evm.TU.LG02.2585 AtPUB30 NM_114841.4 Arabidopsis 25410251 Suppression of Arabidopsis AtPUB30 resulted in increased tolerance to salt stress during germination (negative) evm.TU.LG09.470 prxCa NM_114770.3 Arabidopsis thaliana 8659887 evm.TU.LG10.874 GTR1 NM_114665.4 Arabidopsis thaliana 32563451 GTR1 plays a positive role in lateral root development under salt stress evm.TU.LG02.1758 AtRDUF1 NM_114529.6 Arabidopsis thaliana 23951086 Overexpression enhanced salt tolerance; mutants more sensitive (E3 ligase; positive). evm.TU.LG02.2048 AtCYSb NM_180239.4 Arabidopsis thaliana 18523728 Overexpression increased tolerance to abiotic stress including salt (positive). evm.TU.LG01.1419 AtAIRP3 NM_111812.4 Arabidopsis thaliana 23696092 Overexpression improved salt tolerance (RING E3 ligase; positive). evm.TU.LG03.2156 AtLTL1 NM_111300.4 Arabidopsis 16930315 Overexpression increased salt tolerance (lipid transfer-like protein; positive). evm.TU.LG04.693 AtbHLH17(AtAIB) NM_130216.3 Arabidopsis thaliana 22948308 The transgenic lines exhibited enhanced tolerance to NaCl, Mannitol and oxidative stress.(positive) evm.TU.LG10.1223 nsLTP NM_130081.5 Arabidopsis 32454178 Required for salt tolerance: mutants are hypersensitive to NaCl; overexpression enhances tolerance. evm.TU.LG05.1443 MBF1a NM_129829.4 Zea mays 17234157 MBF1a overexpression elevated salt tolerance in Arabidopsis. evm.TU.LG01.2468 AtOXS2 NM_129754.4 Arabidopsis thaliana 31889067 Overexpression increased salt tolerance; loss-of-function reduced tolerance (positive). evm.TU.LG02.1935 AtCaN2 NM_201920.3 Arabidopsis thaliana 30824054 Arabidopsis Ca2+-dependent nuclease AtCaN2 plays a negative role in plant responses to salt stress (negative). evm.TU.LG07.924 HsfA2 NM_128173.3 ARabidopsis thaliana 17890230 Overexpression enhanced salt tolerance (HSF; positive). evm.TU.LG07.1399 AtDBP1 NM_128120.2 Arabidopsis 32342434 Arabidopsis DBP1 modulates ABA/salt responses; altered lines showed changed salt sensitivity. evm.TU.LG07.1510 PKL NM_128074.4 Arabidopsis thaliana 31354770 Chromatin remodeler; mutants display altered salt responses; overexpression of PKL-related pathways improves salinity tolerance (positive). evm.TU.LG02.2876 HMGB4 NM_127310.3 Arabidopsis thaliana 17169924 Overexpression caused salt-hypersensitive germination (negative for salt tolerance at seed stage). evm.TU.LG04.2290 XERICO NM_126459.3 Arabidopsis 16792696 XERICO overexpression caused salt-hypersensitive germination; negative for salt at seedling stage. evm.TU.LG07.1506 AtZFP1 NM_106721.2 Arabidopsis thaliana 25074582 Overexpression increased salt tolerance (C2H2 zinc-finger; positive). evm.TU.LG04.903 AtPP2-B11 NM_106660.7 Arabidopsis 26041321 E3/PP2-B11 modulates ion transport and salt response; overexpression improves salt tolerance (positive). evm.TU.LG05.1067 AtGSTU19 NM_106485.4 Arabidopsis 25975461 Overexpression enhanced salt tolerance via detoxification/ROS control (positive). evm.TU.LG07.1139 AtSKIP NM_106368.5 Arabidopsis thaliana 19765229 Overexpression enhanced salt tolerance via transcriptional regulation (positive). evm.TU.LG06.762 Adh NM_106362.3 Arabidopsis 11987307 evm.TU.LG10.152 AtHDG11 NM_105996.4 Arabidopsis thaliana 19132376 Overexpression enhanced salt/drought tolerance (root system changes; positive). evm.TU.LG02.2545 Patellin1 (PATL1) NM_105873.3 Arabidopsis 29684208 Overexpression increased salt tolerance (PATL1; positive). evm.TU.LG03.581 CRK2 NM_105720.4 Arabidopsis thaliana 31118265 CRK2 is required for tolerance to salinity: crk2 mutants are hypersensitive to salt/osmotic stress, while CRK2 OE enhances tolerance (positive). evm.TU.LG03.499 AtPPRT1 NM_105556.5 Arabidopsis 32079457 E3 ligase; overexpression improved salt tolerance; mutants hypersensitive (positive). evm.TU.LG02.617 AtMYB20 NM_105294.3 Arabidopsis thaliana 23660402 AtMYB20 overexpression improved tolerance to abiotic stress incl. salt; myb20 mutants were sensitive. evm.TU.LG10.1472 At1g64110 NM_179511.2 Arabidopsis thaliana 23480402 Loss-of-function mutants are salt-sensitive during germination; positive role in salinity tolerance. evm.TU.LG12.1161 AtSLAH1 NM_104908.4 Arabidopsis thaliana 27340232 Loss/altered function reduced shoot Cl- accumulation and increased salt tolerance (negative regulator of tolerance via Cl- loading). evm.TU.LG01.285 AtABCG36 NM_104680.3 Arabidopsis thaliana 20088904 Overexpression improved salt resistance; reduced Na+ accumulation; loss-of-function decreased tolerance (positive). evm.TU.LG05.2093 AtSIBP1 NM_104452.4 Arabidopsis thaliana 31817461 Overexpression improved salt tolerance (BTB/POZ-type; positive). evm.TU.LG01.158 AtALDH7B4 NM_104287.5 Arabidopsis 17080931 Overexpression increased salt tolerance (aldehyde dehydrogenase; positive). evm.TU.LG03.135 ABA2 NM_104113.5 Arabidopsis thaliana 17189333 Functional gene positively contributes to salt tolerance; mutants salt-sensitive (ABA biosynthesis). evm.TU.LG01.643 MKK4 NM_104044.3 Arabidopsis thaliana 21806969 Overexpression enhanced salt tolerance (MAPKK; positive). evm.TU.LG09.286 bHLH122 NM_103993.3 Arabidopsis 24261563 Positive regulator: overexpression increased, knockout decreased salt tolerance. evm.TU.LG08.123 AtRab7 NM_103820.4 Arabidopsis thaliana 14657401 Overexpression increased salt tolerance (Rab7; vesicle trafficking). evm.TU.LG05.769 MYC2 NM_102998.4 Arabidopsis 31782895 Negative regulator: overexpression reduced salt tolerance, while loss-of-function increased tolerance (ABA-dependent). evm.TU.LG05.862 XTH30 NM_102950.4 Arabidopsis thaliana 31257449 negatively affecting salt tolerance (negative). evm.TU.LG12.193 AtAGO2 NM_102866.3 Arabidopsis thaliana 31521214 AGO2 positively regulates salt tolerance; ago2 mutants are salt-sensitive. evm.TU.LG06.345 AtSAT32 NM_202194.3 Arabidopsis thaliana 19210750 Required for salt tolerance; mutants hypersensitive; positive contributor to salt tolerance. evm.TU.LG06.1705 AtRabG3e NM_102121.3 Arabidopsis thaliana 14657401 Overexpression increased salt tolerance (Rab7; vesicle trafficking). evm.TU.LG06.1068 UGT85A5 NM_202156.2 Arabidopsis thaliana 23533660 Ectopic expression enhanced salt tolerance (higher germination, growth under NaCl). evm.TU.LG06.177 FYVE1 NM_101865.4 Arabidopsis thaliana 32540007 overexpression of FYVE1 results in increased sensitivity to salt stress (negative). evm.TU.LG12.782 RABA1 NM_101553.3 Arabidopsis thaliana 22974509 RABA1 members are required for salinity stress tolerance. evm.TU.LG04.1690 AtGSK1 NM_100519.3 Arabidopsis thaliana 11532176 Overexpression conferred NaCl tolerance; positive regulator. evm.TU.LG11.1001 At5PTase7 NM_100426.5 Arabidopsis thaliana 21677096 Positive regulator: overexpression increased tolerance and mutants were salt-hypersensitive. evm.TU.LG04.791 AtLEA14 NM_100029.6 Arabidopsis thaliana 25450686 Overexpression improved salt tolerance (LEA14; positive). evm.TU.LG04.713 CNGC10 NM_001197956.2 Arabidopsis thaliana 25416933 Ion channel in salt response; functional gene supports salt adaptation; mutants salt-sensitive (positive contributor). evm.TU.LG01.647 PGDH2 NM_001035984.2 Arabidopsis 31779918 Overexpression increased salt tolerance via serine biosynthesis/ROS homeostasis (positive). evm.TU.LG10.1592 AtWNK8 NM_123564.3 Arabidopsis thaliana 23535337 Disruption of AtWNK8 enhances tolerance of Arabidopsis to salt and osmotic stresses (negative). evm.TU.LG07.725 SDH NM_119469.4 Arabidopsis 29125673 Overexpression enhanced salt tolerance (succinate dehydrogenase-linked response; positive). evm.TU.LG05.1900 UGT75D1 NM_117646.3 Arabidopsis 26496910 Overexpression enhanced salt tolerance (UDP-glycosyltransferase; hormone/ROS modulation). evm.TU.LG03.871 PP2A-C5 NM_105665.3 Arabidopsis 27676158 Positive regulator: overexpression increased, knockout decreased salt tolerance. evm.TU.LG01.1309 NaKR3 NM_001035775.2 Arabidopsis thaliana 26909945 Loss-of-function impaired Na+/K+ homeostasis; functional gene supports salt tolerance. evm.TU.LG09.1183 UGT76E11 NM_114534.3 Arabidopsis 28902451 Overexpression improved salt tolerance (UGT; positive). evm.TU.LG02.2611 AtACS5 NM_125977.2 Arabidopsis thaliana 15699063 Stress-inducible promoter activity under salt; no direct tolerance phenotype tested in this paper. evm.TU.LG09.926 PDXII NM_125447.2 Arabidopsis thaliana 29807600 Overexpression increased salt tolerance (vitamin B6 biosynthesis; positive). evm.TU.LG01.2526 AtLCY NM_111858.2 Arabidopsis 21471119 Overexpression enhanced salt tolerance via carotenoid pathway (positive). evm.TU.LG12.138 JMJ15 NM_129041.1 Arabidopsis thaliana 25009544 Overexpression increased salt tolerance; mutants more sensitive (positive). evm.TU.LG09.952 GmEF4 NM_001350098.1 Glycine max 31248195 Overexpression enhanced salt tolerance (elongation factor-like; positive). evm.TU.LG02.2546 SPK-3 NM_001249814.1 Glycine max 9267431 evm.TU.LG01.1262 GmSALT3 NM_001353420.1 Glycine max 27746805 GmSALT3 confers salt tolerance by improving Na+/Cl- exclusion; overexpression increases tolerance. evm.TU.LG03.2292 GmWNK1 NM_001377123.1 Glycine max 21925762 Overexpression increased salt tolerance (WNK kinase; positive). evm.TU.LG01.1928 GmSYP24 NM_001371115.1 Glycine max 30979945 Overexpression improved salt tolerance (membrane trafficking/vesicle protein; positive). evm.TU.LG02.2077 GmFDL19 NM_001361986.1 Glycine soja 28640834 Overexpression enhanced salt tolerance (bZIP; positive). evm.TU.LG10.346 GmMYB84 NM_001248860.2 Glycine max 31928665 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG10.1421 GmPIP1;6 NM_001353638.1 Glycine max 24998596 Overexpression improved salt tolerance (better water status/ROS scavenging) in transgenic plants. evm.TU.LG03.1647 GmGSK NM_001255732.2 Glycine max 20155384 exhibited enhanced resistance to salt and drought stress (positive). evm.TU.LG01.608 GmWRKY49 NM_001317594.1 Glycine max 29997634 Overexpression enhanced salt tolerance (WRKY TF; positive). evm.TU.LG05.153 GmCLC1 NM_001249565.2 Glycine max 27504114 Overexpression improved salt tolerance (soybean CLC; positive). evm.TU.LG03.2341 GmNHX1 NM_001253274.2 Glycine max 31690290 Overexpression increased salt tolerance (vacuolar Na+/H+ antiporter; positive). evm.TU.LG05.1564 BrERF4 XM_009137184.3 Brassica rapa 20803085 BrERF4 overexpression enhanced tolerance to salinity and drought. evm.TU.LG07.1589 MfWRKY17 MT383744.1 Myrothamnus Flabellifolia 32610467 Overexpression increased salt tolerance; positive regulator of salt and drought responses. evm.TU.LG10.1257 CmCML13 MT340534.1 Cucumis melo 32795909 Overexpression increased salt tolerance (calmodulin-like protein; positive). evm.TU.LG12.206 SmPPT MH707439.1 Salvia miltiorrhiza 31471635 Overexpression increased salt tolerance (phosphoenolpyruvate/phosphate translocator family; positive). evm.TU.LG02.2535 ZmCPK11 NM_001112282.1 Zea mays 30714160 Overexpression enhanced salt tolerance (CDPK; positive). evm.TU.LG06.673 IbARF5 XM_031258613.1 Ipomoea batatas (L.) Lam.) 30254657 Overexpression increased salt tolerance (auxin response factor; positive). evm.TU.LG03.557 OsMYB6 MK061534.1 Oryza sativa 30833955 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG05.1533 GsZFP1 XM_028339042.1 Glycine soja 23867600 Overexpression improved salt tolerance (C2H2 zinc finger; positive). evm.TU.LG01.1296 Gs5PTase8 XM_028369920.1 Glycine soja 32033113 Overexpression enhanced salt tolerance by modulating inositol signaling (positive). evm.TU.LG03.2542 EVP1 MH458075.1 Eucalyptus globulus 24080396 Vacuolar H+ -PPase; overexpression improved salt tolerance (positive). evm.TU.LG02.2658 OsSHMT3 MG799132.1 Oryza sativa 30941150 Overexpression improved salt tolerance via photorespiration/serine-glycine metabolism (positive). evm.TU.LG01.2541 SpERD15 XM_015218463.2 Solanum pennellii 21576192 Overexpression increased salt tolerance (positive). evm.TU.LG09.1081 LeFAD3 NM_001246862.2 Solanum lycopersicum 24129846 Overexpression increased salt tolerance via PUFA/ROS balance (positive). evm.TU.LG02.2096 SlWRKY8 NM_001346925.1 Solanum lycoperiscum 31017672 Overexpression increased salt tolerance (positive). evm.TU.LG01.2576 ZmGPDH1 MH460963.1 Zea mays 30626322 ZmGPDH1 overexpression improved salt tolerance via glycerolipid metabolism/ROS balance. evm.TU.LG11.446 IpLEA MF680612.1 Ipomoea pes-caprae 31619699 Overexpression enhanced salt tolerance (LEA protein; positive). evm.TU.LG10.1237 Lm-6-SFT KU711081.1 Leymus mollis 31159261 Overexpression enhanced salt tolerance by promoting fructan accumulation (positive). evm.TU.LG07.219 PtDRS1 MF663784.1 Populus trichocarpa 29494985 RNA helicase-like; overexpression enhanced salt tolerance (positive). evm.TU.LG07.796 IbTC KP306524.1 Ipomoea batatas 31639559 Overexpression increased salt tolerance with higher photosystem II activity and chlorophyll under NaCl. evm.TU.LG07.549 BvCMO AF023132.2 Beta vulgaris 18437388 Overexpression improved salt tolerance (glycine betaine pathway; positive). evm.TU.LG01.1013 AhAL1 KU933956.1 Atriplex hortensis 29426828 Overexpression enhanced salt tolerance (positive). evm.TU.LG02.235 PpsnRK1α XM_007215174.2 Prunus persica 32216751 Overexpression (tomato) enhanced salt tolerance (better growth/physiology under NaCl). evm.TU.LG01.931 FvWRKY42 KU207053.1 Fragaria vesca 30107882 FvWRKY42 overexpression improved salt tolerance in Arabidopsis. evm.TU.LG04.476 GmWRKY54 DQ322698.1 Glycine max 18384508 Overexpression increased salt tolerance (positive regulator). evm.TU.LG02.763 GmWRKY21 DQ322691.1 Glycine max 18384508 Overexpression increased salt tolerance (positive regulator). evm.TU.LG07.304 AlTMP2 KY321745.1 Aeluropus littoralis 29450758 Overexpression increased salt tolerance (Aeluropus TMP2; positive). evm.TU.LG03.2471 SbSRP KX242114.1 Salicornia brachiata 28473839 Overexpression improved salt tolerance (salt-responsive protein; positive). evm.TU.LG07.879 AhFC1 KU560625.1 Arachis hypogaea 30710795 Overexpression increased salt tolerance; RNAi/silencing reduced tolerance (positive regulator). evm.TU.LG06.1502 PnLRR-RLK27 KX159251.1 Pohlia nutans 28241081 Overexpression enhanced salt tolerance (LRR-RLK; positive). evm.TU.LG04.369 TaLEA DQ663481.2 Tamarix androssowii 23840708 Overexpression increased salt tolerance (wheat LEA; positive). evm.TU.LG04.498 TsGOLS2 AF499723.2 Thellungiella salsuginea 23728391 Overexpression enhanced salt tolerance via galactinol/raffinose pathway (positive). evm.TU.LG06.1080 TaFBA1 JN038382.2 Triticum aestivum L. 28483055 Overexpression increased salt tolerance in transgenic tobacco (F-box protein; positive). evm.TU.LG02.1956 JcERF2 AP011962.1 Jatropha curcas 25935218 Overexpression increased salt tolerance (ERF TF; positive). evm.TU.LG08.768 IbbZIP1 XM_019313632.1 Ipomoea batatas 31183509 Overexpression enhanced salt tolerance (sweetpotato bZIP; positive). evm.TU.LG05.846 IcSRO1 XM_019300542.1 Ipomea cairica 32033046 Overexpression lines showed improved salinity tolerance (better germination and seedling performance under NaCl). evm.TU.LG06.1666 PagGIa KT875324.1 Populus alba x Populus glandulosa 27565626 GIGANTEA homolog; overexpression decreased salt tolerance, knock-down increased tolerance (negative regulator). evm.TU.LG07.1346 JAZ1 KT312824.1 Gossypium arboreum 32211392 JAZ1 overexpression generally increases salt sensitivity; knockdown enhances tolerance (negative regulator). evm.TU.LG01.2333 MsHsp23 KM604227.1 Medicago sativa 25049632 Overexpression improved salt tolerance (small HSP; positive). evm.TU.LG06.1223 VaRGA1 KU301796.1 Vitis amurensis 27468994 Overexpression enhanced salt tolerance (RGA1-related TF; positive). evm.TU.LG01.2931 Nt-Ub1 DQ830978.2 Tobacco 22187972 Overexpression improved salt tolerance (ubiquitin; positive). evm.TU.LG09.1083 CaKR1 DQ862464.1 Capsicum annuum 17927963 Overexpression increased salt tolerance (aldo-keto reductase; positive). evm.TU.LG03.687 MaRGS KX099868.1 Morus alba 31559897 Overexpression enhanced salt tolerance (regulator of G signaling; positive). evm.TU.LG11.963 MaGγ2 KX099867.1 Morus alba L. 30587818 Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator. evm.TU.LG08.126 MaGβ KX099865.1 Morus alba L. 30587818 Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator. evm.TU.LG07.699 Morus alba G- Proteins (MaGα ) KX099864.1 Morus alba L. 30587818 Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator. evm.TU.LG01.468 SbSLSP KF111691.1 Salicornia brachiata 27313584 Overexpression enhanced salt tolerance (stress-related protein; positive). evm.TU.LG01.1757 LcCRTISO KJ700839.1 Lycium chinense 32174932 Overexpression increased salt tolerance (carotenoid biosynthesis; positive). evm.TU.LG04.1685 AdDjSKI KJ658279.1 Arachis diogoi 29807607 Overexpression enhanced salt tolerance (positive regulator). evm.TU.LG02.216 SlNAC2 KT740994.1 Solanum lycopersicum 30919132 Overexpression (tomato) enhanced salt tolerance (lower ROS, improved survival). evm.TU.LG10.1624 BpNAC012 KT344119.1 Betula platyphylla 30530740 Overexpression increased salt tolerance (positive). evm.TU.LG12.125 StGA2ox1 XM_006359960.2 Solanum tuberosum 30191466 Overexpression increased salt tolerance (GA 2-oxidase; positive). evm.TU.LG10.1519 GhWRKY41 KJ183064.1 Gossypium hirsutum 26562293 Overexpression enhanced salt tolerance (WRKY TF; positive). evm.TU.LG04.731 GhWRKY34 KJ825876.1 Gossypium hirsutum 26332661 Overexpression reduced tolerance (negative regulator) or knockdown improved stress tolerance (negative). evm.TU.LG12.810 MdCIPK13 KT336295.1 Malus x domestica 29791976 Overexpression enhanced salt tolerance (positive). evm.TU.LG09.1116 QR KP979357.1 Salix matsudana 26541063 Overexpression enhanced salt tolerance (positive). evm.TU.LG12.1238 HcSCL13 KC686400.1 Halostachys caspica 32240936 Overexpression improved salt tolerance (positive regulator). evm.TU.LG08.1162 SlNAC8 KR010360.1 Suaeda liaotungensis 29631006 Overexpression increased salt tolerance in tomato (positive). evm.TU.LG11.55 LcPDS KJ143993.1 Lycium chinense 32174932 Overexpression increased salt tolerance (carotenoid biosynthesis; positive). evm.TU.LG11.341 ThZFL KM434773.1 Tamarix hispida 21327695 Overexpression increased salt tolerance (Tamarix zinc-finger-like; positive). evm.TU.LG09.1296 EaHSP70 KJ670162.1 Erianthus arundinaceus 25617320 Overexpression enhanced salt tolerance (Eutrema HSP70; positive). evm.TU.LG11.1 LbGRP1 GQ398238.1 Limonium bicolor (Bunge) Kuntze 21573794 Overexpression increased salt tolerance (glycine-rich protein; positive). evm.TU.LG03.2287 LcZDS KJ174516.1 Lycium chinense 32174932 Overexpression increased salt tolerance (carotenoid biosynthesis; positive). evm.TU.LG07.1021 TaBASS2 KP638564.1 Triticum aestivum L. 27160076 Overexpression improved salt tolerance by enhancing photorespiratory flux/pyruvate transport (ABA-dependent responses). evm.TU.LG05.14 vacuolar ATPase subunit D1 JN107805.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG08.193 vacuolar ATPase subunit A JN033547.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG03.505 GhRAV1 KJ801819.1 Gossypium hirsutum 25710493 Overexpression increased salt tolerance (RAV TF; positive). evm.TU.LG05.1782 EcbHLH57 KP064138.1 Eleusine coracana 26366726 Overexpression increased salt tolerance (bHLH; positive). evm.TU.LG09.823 KcCSD KP143653.1 Kandelia candel 25657655 Overexpression increased salt tolerance (Cu/Zn-SOD from Kandelia; positive). evm.TU.LG07.1060 PaMBF1c KM978992.1 Polytrichastrum alpinum 28744295 Overexpression (PaMBF1c) enhanced salt and osmotic tolerance in Arabidopsis. evm.TU.LG01.505 IbMas KM095957.1 Ipomoea batatas (L.) Lam. 25501819 Overexpression increased tolerance to salt (and drought/oxidative stress), with higher PSII activity and chlorophyll under stress. evm.TU.LG06.628 PeJRL XM_011003496.1 Populus euphratica 30769802 Overexpression improved salt tolerance (jacalin-related lectin; positive). evm.TU.LG07.475 PeXTH XM_011045697.1 Populus euphratica 24085577 Overexpression increased salt tolerance (Populus euphratica XTH; positive). evm.TU.LG05.1661 PeNAC036 XM_011031134.1 Populus euphratica 28776695 Overexpression enhanced salt tolerance (positive). evm.TU.LG03.2109 ChVDE KM504154.1 Cerasus humilis 31065497 Overexpression improved salt tolerance by enhancing NPQ/photoprotection (positive). evm.TU.LG05.159 CaDSR6 KJ858682.1 Capsicum annuum 25234727 Overexpression enhanced salt tolerance (defense-related protein; positive). evm.TU.LG01.1357 DgWRKY5 KC615359.1 Dendronthema grandiform 28684847 Overexpression increased salt tolerance (WRKY TF; positive). evm.TU.LG07.283 DgWRKY4 KC615358.1 Dendronthema grandiform 28959270 Overexpression enhanced salt tolerance (chrysanthemum WRKY; positive). evm.TU.LG02.777 DgWRKY2 KC615356.1 Dendranthema grandiflorum 30012947 Overexpression enhanced salt tolerance (chrysanthemum WRKY2; positive). evm.TU.LG02.2136 MsZEP KM044311.1 Medicago sativa 26573680 Overexpression increased salt tolerance (alfalfa ZEP; positive). evm.TU.LG10.816 AnBADH KJ841914.1 Ammopiptanthus nanus 25046139 Overexpression improved salt tolerance (betaine aldehyde dehydrogenase; positive). evm.TU.LG04.551 GhWRKY6 KF669821.1 Gossypium hirsutum 31080461 Overexpression enhanced salt tolerance (cotton WRKY6; positive). evm.TU.LG07.1160 MdHXK1 KF438039.1 Malus domestica Borkh. 29440593 Overexpression enhanced salt tolerance (hexokinase-mediated signaling; positive). evm.TU.LG04.2361 MdATG10 KF438033.1 Malus domestica 32234232 Overexpression enhanced salt tolerance (autophagy-related; positive). evm.TU.LG02.583 PacMYBA KF974774.1 Prunus avium 28126679 PacMYBA, a sweet cherry R2R3-MYB transcription factor, is a positive regulator of salt stress tolerance and pathogen resistance. (positive) evm.TU.LG02.2321 PeSCL7 KJ511863.1 Populus euphratica 20616154 Overexpression enhanced salt tolerance (GRAS TF; positive). evm.TU.LG06.395 GhWRKY17 HQ651068.1 Gossypium hirsutum 25261532 Overexpression altered salt responses; increased sensitivity when overexpressed (negative regulator). evm.TU.LG11.741 TaPUB1 JX307854.1 Triticum aestivum L. 31119835 Overexpression enhanced salt tolerance (U-box E3 ligase; positive). evm.TU.LG09.405 GmF6′H1 KJ463390.1 Glycine max 31247427 Overexpression improved salt tolerance via flavonoid pathway (positive). evm.TU.LG02.694 CaMIPS2 EU714005.1 Cicer arietinum 23065054 Overexpression enhanced salt tolerance via myo-inositol pathway (positive). evm.TU.LG02.461 BcPMI2 JN039346.1 Brassica rapa subsp. chinensis 24430300 Overexpression increased salt tolerance (phosphomannose isomerase; positive). evm.TU.LG01.1424 GsPIP2;1 FJ825766.1 Glycine soja 25358447 Overexpression improved salt tolerance (soybean aquaporin; positive). evm.TU.LG04.346 SbUSP KF164282.1 Salicornia brachiata 24291028 Overexpression enhanced salt tolerance (universal stress protein; positive). evm.TU.LG05.1088 CrNCED1 KC825343.1 Citrus reshni 24068300 Overexpression enhanced tolerance to salt stress (positive; ABA-related). evm.TU.LG06.1097 JcAPX KF792062.1 Jatropha curcas 25966262 Overexpression enhanced salt tolerance with lower ROS/MDA; antioxidant enzyme activity increased. evm.TU.LG04.692 MnDREB4A KF678389.1 Morus alba L. 26695076 Overexpression increased salt tolerance (mulberry DREB4A; positive). evm.TU.LG12.1270 AcHMA1 KF863910.1 Atriplex canescens (Pursh) Nutt., 25153638 Overexpression enhanced salt tolerance (positive). evm.TU.LG03.432 TaPI4KIIγ KC357689.1 Triticum aestivum 23682116 Overexpression enhanced salt tolerance (PI4K; positive). evm.TU.LG04.1212 GhWRKY39-1 KF220641.1 Gossypium hirsutum 24337818 Overexpression improved tolerance to salt stress (positive). evm.TU.LG11.1444 VpSBP16 JX845247.1 Vitis pseudoreticulata 29565279 Overexpression increased salt tolerance (SBP-box TF; positive). evm.TU.LG07.1524 TaWRKY79 JX047374.1 Triticum aestivum L. 19941154 Overexpression enhanced salt tolerance (WRKY TF; positive). evm.TU.LG06.1024 JcDREB JX860302.1 Jatropha curcas 21958703 Overexpression increased salt tolerance via stress-responsive gene activation (positive regulator). evm.TU.LG04.2045 TPX2 KF701483.1 Nicotiana tabacum 10486568 Overexpression of TPX2 had no effect on wild-type development, but greatly increased the germination rate under high salt or osmotic stress. (positive). evm.TU.LG07.897 NsylCBL10 KF667488.1 Nicotiana sylvestris 26318216 Overexpression improved salt tolerance via better Na+ balance; positive regulator. evm.TU.LG02.1781 PpGMP KF586841.1 Pogonatherum paniceum 27442366 Overexpression increased salt tolerance (GDP-mannose pyrophosphorylase; ascorbate pathway; positive). evm.TU.LG10.871 ZoCDPK1 KC544003.1 Zingiber officinale 24194837 Overexpression improved salt tolerance (Zoysia CDPK; positive). evm.TU.LG01.1480 LcMYB1 KC154048.1 Leymus chinensis 23800660 Overexpression increased tolerance to salt (and drought) in transgenic plants ( positive). evm.TU.LG01.67 TaSIP HM205107.1 Triticum aestivum L. 23400831 Salt-induced protein; overexpression enhanced salt tolerance. evm.TU.LG07.669 PfHSP17.2 JX025006.1 Primula forrestii 30235397 Overexpression (in Arabidopsis) increased tolerance to heat and salt; positive role. evm.TU.LG02.2117 ThTrx5 KC164769.1 Tamarix hispida 32050573 Overexpression improved salt tolerance (thioredoxin; positive). evm.TU.LG06.351 PtrZPT2-1 KC820894.1 Poncirus trifoliata 28818385 Overexpression increased salt tolerance (zinc finger TF; positive). evm.TU.LG04.1968 GbRLK KC422776.1 Gossypium barbadense 23915077 Overexpression improved salt tolerance (cotton RLK; positive). evm.TU.LG03.275 PttEXPA8 JX986668.1 Populus tomentosa 30797010 Overexpression enhanced salt tolerance (expansin; positive). evm.TU.LG07.1271 GhMKK1 HQ828075.1 Gossypium hirsutum 23844212 Overexpression in tobacco enhanced salt tolerance; silencing increased sensitivity (positive). evm.TU.LG06.1521 ThNAC7 JQ974961.1 Tamarix hispida. 31336966 Overexpression increased salt tolerance (Tamarix NAC7; positive). evm.TU.LG07.262 GhCIPK6 KC465063.1 Gossypium hirsutum 23660187 Overexpression increased salt tolerance (cotton CIPK6; positive). evm.TU.LG02.238 GhWRKY25 JF899343.1 Gossypium hirsutum 26410829 Overexpression enhanced salt tolerance (WRKY TF; positive). evm.TU.LG07.809 StDREB1 JN125862.1 Solanum tuberosum 23250722 Overexpression enhanced salt tolerance (potato DREB1; positive). evm.TU.LG01.2706 MfARL1 JX292786.1 Medicago falcata 23298681 Overexpression increased salt tolerance (ARF-like GTP-binding protein; positive). evm.TU.LG01.1113 GsGSTU13 JQ031559.1 Glycine soja 26010993 Overexpression increased salt tolerance (glutathione S-transferase; positive). evm.TU.LG03.1122 SpSOS1 JX674067.1 sesuvium portulacastrum 30764771 Overexpression increased salt tolerance (SOS1 homolog; positive). evm.TU.LG07.76 SpAHA1 JX628604.1 Sesuvium portulacastrum 29948367 Overexpression enhanced salt tolerance (PM H+-ATPase; improved ion homeostasis; positive). evm.TU.LG03.1064 ApKUP4 JN635520.1 Alternanthera philoxeroides 24824834 KUP/HAK transporter; overexpression increased salt tolerance (positive). evm.TU.LG04.642 CaHDZ12 JX508649.1 Cicer arietinum 29016956 Overexpression enhanced salt tolerance (HD-ZIP TF; positive). evm.TU.LG01.900 HbCIPK2 JN831652.1 Hordeum brevisubulatum 22458849 Overexpression enhanced salt tolerance (CIPK; positive). evm.TU.LG06.976 TaST AY956330.1 Triticum aestivum 21993814 Salt tolerance-related gene; overexpression increased salt tolerance (positive). evm.TU.LG02.676 PeDREB2a EF597499.1 Populus euphratica 22771912 Overexpression increased salt tolerance (DREB2a; positive). evm.TU.LG01.2070 ThbZIP1 JX169822.1 Tamarix hispida 24093718 Overexpression increased salt tolerance (positive). evm.TU.LG01.218 JcERF1 HM776314.1 Jatropha curcas 25540008 Overexpression increased salt tolerance (Jatropha ERF; positive). evm.TU.LG04.1289 TaMYB33 JN584645.1 Triticum aestivum L. 22350156 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG09.1275 SbMT-2 JF780913.1 Salicornia brachiata 25340650 Overexpression increased salt tolerance (metallothionein; positive). evm.TU.LG01.1943 Th2CysPrx JQ341202.1 Tamarix hispida 32731892 Overexpression increased salt tolerance (2-Cys peroxiredoxin; enhanced ROS detox). evm.TU.LG05.784 GhPLATZ1 JQ837703.1 Gossypium hirsutum 30286716 Heterologous expression reduced sensitivity to osmotic and salt stress at germination/seedling stages. evm.TU.LG08.325 AcPIP2 JN632585.1 Atriplex canescens 25947559 Overexpression increased salt tolerance (aquaporin; water status). evm.TU.LG08.304 RaAPX DQ078123.2 Rheum australe 25754733 Overexpression increased salt tolerance (positive regulator). evm.TU.LG01.2115 TaSRG FJ432082.1 Triticum aestivum 21457711 Overexpression enhanced salt tolerance (salt responsive gene; positive). evm.TU.LG02.776 AlSAP DQ885218.1 Aeluropus littoralis 19838809 Overexpression increased tolerance to multiple stresses including salinity (positive). evm.TU.LG02.434 TaGF14b JN650603.1 Triticum aestivum 29616395 Overexpression enhanced salt tolerance (14-3-3; positive). evm.TU.LG08.40 ZmSAPK8 EU531501.1 Zea mays 21638061 Overexpression improved salt tolerance (SnRK2; positive). evm.TU.LG01.802 MusaWRKY71 HM640262.1 banana 24116051 Overexpression enhanced salt tolerance (positive). evm.TU.LG03.1060 MdSPDS1 AB072915.3 Malus domestica 17549601 Overexpression increased salt tolerance via polyamine accumulation (positive). evm.TU.LG08.228 PtADC HQ008237.1 Poncirus trifoliata 21282323 Overexpression increased salt tolerance via polyamine biosynthesis (positive). evm.TU.LG08.525 K2-NhaD HQ585057.1 Gossypium hirsutum 31989373 Heterologous expression of Na+/H+ antiporter improved salt tolerance. evm.TU.LG01.879 NtLTP4 AB625595.1 Nicotiana tabacum 29891874 Overexpression enhanced salt tolerance (positive). evm.TU.LG05.38 EaCHS1 FJ913888.2 Eupatorium adenophorum 25632925 Overexpression increased salt tolerance (chalcone synthase; positive). evm.TU.LG01.2119 AaDREB1 HQ889135.1 Adonis amurensis 27110776 Overexpression increased salt tolerance; positive. evm.TU.LG10.1032 TaABC1 HM773264.1 Triticum aestivum L. 21115661 Overexpression improved salt tolerance (Atypical kinase; positive). evm.TU.LG12.195 MhNPR1 GU183100.1 Malus hupehensis 24407603 Overexpression enhanced salt tolerance (positive). evm.TU.LG10.944 GST AF321437.1 Suaeda salsa 15627705 Overexpression of GST gene accelerates the growth of transgenic Arabidopsis under salt stress (positive). evm.TU.LG02.2851 CAChi2 AF091235.1 Capsicum annuum 16151843 Overexpression increased salt tolerance (chitinase; positive). evm.TU.LG03.2572 EsCSP41b AK352800.1 Eutrema salsugineum 26123393 Chloroplast RNA-processing protein; salt phenotype not clearly specified. evm.TU.LG08.341 vacuolar ATPase subunit B1 EF105343.1 Triticum aestivum L. 21344312 Overexpression of V-ATPase B1 improved salt tolerance (enhanced vacuolar H+ pumping). evm.TU.LG03.1822 vacuolar ATPase subunit H DQ681104.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG02.1023 vacuolar ATPase subunit G DQ491026.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG03.2263 vacuolar ATPase subunit F DQ486058.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG07.1006 PutAKT1 GU327382.1 Puccinellia tenuiflora 20532513 Overexpression increased salt tolerance by supporting K+ homeostasis (positive). evm.TU.LG02.2766 CsF3H AY641730.1 Camellia sinensis 24880475 Overexpression increased salt tolerance, likely via flavonoid-mediated ROS control. evm.TU.LG04.526 SbSAMS AY635050.1 Solanum brevidens 25559387 Overexpression increased salt tolerance via S-adenosylmethionine pathway (positive). evm.TU.LG01.2257 CAPIP2 AY548742.1 Capsicum annuum 16900319 Aquaporin from pepper; overexpression increased salt tolerance (positive). evm.TU.LG06.425 SlAREB AY530758.1 Solanum lycopersicum 20358223 Overexpression increased salt tolerance (AREB/ABF TF; positive). evm.TU.LG04.388 CaERFLP1 AY529642.1 Capsicum annuum L. cv. Pukang 15604665 Overexpression enhanced salt tolerance (ERF-like TF; positive). evm.TU.LG07.830 cytoNADP-ME AY444338.1 Oryza sativa 17516134 Overexpression increased salt tolerance (cytosolic NADP-malic enzyme; improved osmotic/ROS balance). evm.TU.LG03.463 SAMDC U38527.1 Dianthus caryophyllus 16642382 Overexpression increased salt tolerance via elevated polyamines (positive). evm.TU.LG02.1883 FAD8 L27158.1 Arabidopsis thaliana 16236147 Omega-3 desaturase; overexpression improved salt tolerance (positive). evm.TU.LG11.959 GmCaM4 L01433.1 Glycine max 24118726 Overexpression improved salt tolerance (calmodulin; Ca2+ signaling). evm.TU.LG10.1413 Del M84913.1 Antirrhinum majus 28335727 Overexpression enhanced salt tolerance in transgenic plants. evm.TU.LG06.640 SPCP2 AF242373.1 Ipomoea batatas 20129700 Transgenic Arabidopsis with constitutive SPCP2 expression exhibited higher salt and drought stress tolerance (positive). evm.TU.LG01.425 TaNIP DQ530420.1 Triticum aestivum L. 20360019 Overexpression improved salt tolerance (aquaporin/NIP; positive). evm.TU.LG02.1784 PvP5CS2 EU407263.1 Phaseolus vulgaris 24371167 Overexpression enhanced salt tolerance via proline accumulation (positive). evm.TU.LG07.364 LcSAMDC1 GU580935.1 Leymus chinensis 28178573 Overexpression increased salt tolerance (polyamine biosynthesis; positive). evm.TU.LG03.77 TopoII AY169238.2 Nicotiana tabacum 27630644 Over-expression of Topoisomerase II Enhances Salt Stress Tolerance in Tobacco.(positive) evm.TU.LG12.272 MCM6 AY169793.2 Pisum sativum 21365356 Overexpression of MCM6 increased tolerance to salt and osmotic stress in Arabidopsis. evm.TU.LG09.705 mcSKD1 AF165422.2 Mesembryanthemum crystallinum (ice plant) 15604658 Overexpression enhanced salt tolerance (AAA-ATPase; positive). evm.TU.LG06.405 GhDREB AF509502.1 Gossypium hirsutum 19005655 Overexpression enhanced salt tolerance (cotton DREB; positive). evm.TU.LG06.886 StAPX AF413573.1 Solanum lycopersicum 20524119 Overexpression improved salt tolerance through enhanced ROS scavenging. evm.TU.LG11.229 gly II AY054407.1 Oryza sativa 14638937 Overexpression of glyoxalase II increased salt tolerance (methylglyoxal detox). evm.TU.LG08.220 DsALDP AF329674.1 Dunaliella salina 20213361 Overexpression improved salt tolerance (aldehyde dehydrogenase-like; positive). evm.TU.LG01.2572 ACA4 AF200739.1 Arabidopsis thaliana 11115896 increased salt tolerance. (positive) evm.TU.LG04.444 ThbZIP1 FJ752700.1 Tamarix hispida 19853962 Overexpression increased salt tolerance (bZIP TF; positive). evm.TU.LG01.542 p68 AF271892.1 Pisum sativum 30622848 RNA helicase; overexpression enhanced salt tolerance (positive regulator). evm.TU.LG09.65 AAO AF233593.1 Cucumis melo 15883131 Overexpression enhanced salt tolerance (oxidase-related; positive). evm.TU.LG07.1550 TSIP1 AF118129.1 Nicotiana tabacum 16844903 Overexpression increased salt tolerance (Thellungiella salt-induced protein 1; positive). evm.TU.LG03.1839 gamma-TMT AF104220.1 Arabidopsis thaliana 20144585 Overexpression increased salt tolerance via elevated tocopherols (positive). evm.TU.LG08.762 PFLP AF039662.1 Capsicum annuum 32750653 Overexpression of plant ferredoxin-like protein promotes salinity tolerance in rice (positive) evm.TU.LG02.2674 MTD AF067082.1 Apium graveolens 11725947 evm.TU.LG01.528 Tsi1 AF058827.1 Nicotiana tabacum 11340180 Overexpression increased salt tolerance (AP2/ERF-related TF; positive). evm.TU.LG06.863 GhNAC2 EU706339.1 Gossypium hirsutum 27113714 Overexpression improved salt tolerance (NAC TF; positive). evm.TU.LG02.1702 TaMnSOD AY573576.2 Tamarix androssowi 19830589 Overexpression improved salt tolerance via ROS scavenging (positive). evm.TU.LG01.2200 SsCBF1 GU129700.1 Solanum lycopersicoides 23755095 Overexpression enhanced salt tolerance; positive. evm.TU.LG03.658 PsSEOF-1 GQ478228.1 Pisum sativum 26825595 Overexpression enhanced salt tolerance (F-box/TF-like; positive). evm.TU.LG08.268 GhCyp1 GQ292530.1 Gossypium hirsutum 22000049 Overexpression increased salt tolerance (cyclophilin; positive). evm.TU.LG10.1128 CaBI-1 FJ719768.1 Capsicum annuum 19524322 Overexpression improved salt tolerance by reducing cell death (Bax inhibitor; positive). evm.TU.LG03.2278 GmGT-2B EF221754.1 Glycine max 19730734 Overexpression enhanced salt tolerance (trihelix TF; positive). evm.TU.LG02.821 GmGT-2A EF221753.1 Glycine max 19730734 Overexpression enhanced salt tolerance (trihelix TF; positive). evm.TU.LG03.168 SbGSTU EF373062.1 Salicornia brachiata 21136169 Overexpression increased salt tolerance (tau-class GST; positive). evm.TU.LG02.664 AnnBj2 EF028226.1 Brassica juncea 29744759 Overexpression (heterologous) conferred enhanced salt tolerance. evm.TU.LG11.811 MdcyMDH DQ221207.1 Malus x domestica 21236692 Overexpression enhanced salt tolerance (malate dehydrogenase; positive). evm.TU.LG04.1803 GhZFP1 AY887895.1 Gossypium hirsutum 19402879 Overexpression increased salt tolerance (C2H2-type zinc finger; positive). evm.TU.LG04.2049 OsICL EF152575.1 Oryza sativa 31694539 Overexpression increased salt tolerance via glyoxylate cycle (positive). evm.TU.LG01.689 vacuolar proton-ATPase subunit A DQ432014.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG10.1446 ZmSIMK1 AY433815.1 Zea mays 20339925 Overexpression improved salt/osmotic tolerance (MAPK; positive). evm.TU.LG01.2667 AtCYSa AY084769.1 Arabidopsis thaliana 18523728 Overexpression increased tolerance to abiotic stress including salt (positive). evm.TU.LG01.2654 MUG13.4 AY059918.1 Arabidopsis thaliana 31521214 AGO2 positively regulates salt tolerance; ago2 mutants are salt-sensitive. evm.TU.LG01.471 CsPLDα EF363796.2 Cucumis sativus 28439282 Overexpression/activation improved salt tolerance via phospholipase D signaling (positive). evm.TU.LG12.963 CaRma1H1 AY513612.2 Capsicum annuum 22555403 Overexpression improved tolerance to drought and high salinity (positive). evm.TU.LG06.616 GhMPK2 DQ132852.1 Gossypium hirsutum (Cotton) 21590508 Overexpression increased salt tolerance (cotton MAPK2; positive). evm.TU.LG02.498 ThMT3 AB298390.1 Tamarix hispida 20835888 Overexpression enhanced salt tolerance (metallothionein; positive). evm.TU.LG04.60 AtRGGA FM209282.1 Arabidopsis 25783413 Overexpression enhanced salt tolerance (glycine-rich RNA-binding protein; positive). evm.TU.LG10.1102 GmcBL1 BT092219.1 Glycine max 23044418 Overexpression (soybean CBL1) enhanced plant tolerance to high salinity; positive regulator. evm.TU.LG02.2576 SlNAGS1 FJ543466.1 Solanum lycopersicum 19357433 Overexpression increased salt tolerance (via arginine/polyamine pathway; positive). evm.TU.LG02.888 SAL1 U40433.1 Arabidopsis thaliana 8721754 Loss-of-function is salt-sensitive; functional SAL1 supports tolerance (positive role). evm.TU.LG01.2477 Vv-α-gal/SIP EU543561.1 Vitis vinifera 29150723 Overexpression enhanced salt tolerance (sugar metabolism; positive). evm.TU.LG03.2101 GmNAC11 EU440354.1 Glycine max 21707801 Overexpression increased tolerance to salt (and drought) (positive). evm.TU.LG04.723 CaAMP1 AY548741.1 Capsicum annuum 18956212 Overexpression enhanced salt tolerance (antimicrobial peptide; positive). evm.TU.LG10.666 TaUBA DQ211935.1 Triticum aestivum L. 25604990 Overexpression increased salt tolerance (ubiquitin-activating enzyme/ubiquitin pathway; positive). evm.TU.LG11.510 ZmMPK5 EU965114.1 Zea mays 23952812 Overexpression enhanced salt tolerance (MAPK; positive). evm.TU.LG02.66 CsCCD4b EU523663.1 Crocus sativus 26595090 Overexpression of CsCCD4b, in Arabidopsis imparts tolerance to dehydration, salt and oxidative stresses (negative) evm.TU.LG01.2093 AeMDHAR EF031032.1 Acanthus ebracteatus 22024734 Overexpression enhanced salt tolerance (MDHAR from halophyte; positive). evm.TU.LG11.1198 ZmALDH22A1 EU019896.1 Zea mays 18688729 Overexpression enhanced salt tolerance (aldehyde dehydrogenase; positive). evm.TU.LG10.83 ZmPEAMT1 AY626156.3 Zea mays 17914189 Overexpression enhanced salt tolerance via phosphoethanolamine methyltransferase pathway (positive). evm.TU.LG04.761 GmbZIP78 DQ787043.1 Glycine max 18365246 Overexpression improved salt tolerance; RNAi increased sensitivity. evm.TU.LG07.1625 GmbZIP62 DQ787039.1 Glycine max 18365246 Overexpression improved salt tolerance; RNAi increased sensitivity. evm.TU.LG12.914 GmERF7 EU747723.1 Glycine max 23111158 Overexpression conferred greater salt tolerance (positive regulator). evm.TU.LG09.980 CsNMAPK DQ812086.1 Cucumis. sativus 19888676 Overexpression increased salt tolerance (MAPK; positive). evm.TU.LG02.2452 vacuolar ATPase subunit c DQ631550.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG02.156 vacuolar ATPase subunit D DQ631549.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG05.80 vacuolar ATPase subunit C DQ631548.1 Triticum aestivum 24498005 Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive). evm.TU.LG03.2350 PaSOD EU532614.1 Potentilla atrosanguinea 25754733 Overexpression increased salt tolerance (positive regulator). evm.TU.LG07.604 OsMGD AB112060.1 Oryza sativa 24843077 Overexpression (OsMGD) improved salt tolerance via membrane lipid remodeling. evm.TU.LG10.1547 OsUGE-1 AB087745.1 Oryza sativa 17566602 Overexpression increased salt tolerance (UDP-galactose 4-epimerase; positive). evm.TU.LG02.1544 DHAR1 AB037970.1 Oryza sativa 17032619 Overexpression increased salt tolerance via ascorbate recycling (positive). evm.TU.LG04.2367 Nt107 D10524.1 Nicotiana tabacum 11092907 Overexpression enhanced salt tolerance (positive). evm.TU.LG05.1465 GhPEPC2 EU032328.1 Gossypium hirsutum 29650157 Overexpression increased salt tolerance (positive). evm.TU.LG01.1536 PgTIP1 DQ237285.1 Panax ginseng 17443343 Overexpression increased salt tolerance (transgenic plants had better growth/vigor under NaCl via enhanced vacuolar Na+ sequestration). evm.TU.LG02.1843 CsPIP1;1 EF202176.1 Cucumis sativus 17675323 Overexpression increased salt tolerance (aquaporin; positive). evm.TU.LG04.109 GmDREB6 EF551166.1 Glycine max 31873128 Overexpression enhanced salt tolerance (soybean; positive). evm.TU.LG10.781 VpALDH2B4 DQ150256.1 Vitis pseudoreticulata 22437646 Overexpression increased salt tolerance (aldehyde dehydrogenase; positive). evm.TU.LG06.1690 WsSGTL1 DQ356887.1 Withania somnifera 23646175 Overexpression increased salt tolerance (sterol glucosyltransferase; positive). evm.TU.LG05.252 CaRFP1 AY775334.1 Capsicum annuum 17149652 Overexpression increased salt tolerance (RING-finger protein; positive). evm.TU.LG10.1383 NnGPX EF421198.1 Nelumbo nucifera L. 24715609 Overexpression enhanced salt tolerance (glutathione peroxidase; positive). evm.TU.LG12.924 CaSBP12 EF141196.1 Capsicum annuum 31936712 Overexpression enhanced salt tolerance (positive regulator). evm.TU.LG09.981 cytAPX X62077.1 Spinacia oleracea 23750614 Overexpression of cytosolic APX increased salt tolerance (positive). evm.TU.LG10.514 CaMADS DQ999998.1 Capsicum annuum 30823994 Overexpression increased salt tolerance (MADS TF; positive). evm.TU.LG07.672 GmPHD6 DQ973811.1 Glycine max 19789627 Overexpression increased salt tolerance (PHD-finger TF; positive). evm.TU.LG08.1071 GmPHD5 DQ973810.1 Glycine max 19789627 Overexpression increased salt tolerance (PHD-finger TF; positive). evm.TU.LG06.20 CAbZIP1 AY775332.1 Capsicum annuum 16718483 Overexpression enhanced salt (and drought) tolerance (pepper bZIP1; positive). evm.TU.LG02.11 GmMYB177 DQ822925.1 Glycine max 18725908 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG04.673 GmMYB92 DQ822903.1 Glycine max 18725908 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG04.494 GmMYB76 DQ822895.1 Glycine max 18725908 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG06.383 GmMYB68 DQ822890.1 Glycine max 31550433 Overexpression increased salt tolerance in soybean/heterologous tests (positive). evm.TU.LG12.784 CaWRKY27 DQ102364.1 Capsicum annuum 31665666 Overexpression enhanced salt tolerance (positive). evm.TU.LG07.1084 Pj Rab7 Z73943.1 Prosopis juliflora 20862551 Overexpression increased salt tolerance (Rab7; vesicle trafficking). evm.TU.LG09.1173 DcHsp17.7 X53851.1 Daucus carota L. 21539946 Overexpression increased salt tolerance in transgenic plants; positive role under abiotic stress. evm.TU.LG03.943 PDH45 Y17186.1 Pisum sativum 21847021 Overexpression enhanced salt tolerance (pea DNA helicase; positive). evm.TU.LG09.850 Gly I Y13239.1 Brassica juncea 10205896 Overexpression increased salt tolerance (glyoxalase I; positive). evm.TU.LG02.1139 ZmNADP-MDH X16084.1 Zea mays 28942523 Overexpression improved salt tolerance via redox/malate shuttle (positive). evm.TU.LG06.81 GhCAT1 X52135.1 Gossypium hirsutum 23335985 Overexpression increased salt tolerance via enhanced H2O2 scavenging (positive). evm.TU.LG06.1661 TaPRX-2A AJ878510.1 Triticum aestivum 32847515 Overexpression enhanced salt tolerance via ROS-scavenging; knockdown reduced tolerance. evm.TU.LG03.482 Atppc4 AJ532903.1 Arabidopsis 16283377 evm.TU.LG04.765 BveIF1A AJ251896.1 Beta vulgaris 12713533 Overexpression of eIF1A enhanced salt tolerance (positive). evm.TU.LG02.936 BvCKA2 AJ251895.1 Beta vulgaris 11725943 Expression in yeast complemented salt-sensitive growth; suggests contribution to salt tolerance. evm.TU.LG03.2541 TaCRT1 AY836753.1 Triticum aestivum L. 26469859 Overexpression increased salt tolerance (calreticulin; Ca2+-related). evm.TU.LG10.1368 Osmotin X61679.1 Tobacco 20549349 Overexpression increased salt tolerance in transgenic plants. evm.TU.LG01.1169 OCPI2 AJ601438.1 Oryza sativa 25910649 Overexpression increased salt tolerance (protease inhibitor; positive). evm.TU.LG01.147 RelA/SpoT AB079577.1 Suaeda japonica 12552141 Heterologous expression (ppGpp pathway) conferred improved salt/drought tolerance in plants (positive). evm.TU.LG02.423 AOC AB037929.2 Bruguiera sexangula 12198193 enhanced salt tolerance.(positive) evm.TU.LG02.2047 BvM14 AB038392.1 beta vulgaris 22682568 Overexpression increased salt tolerance (positive regulator under salinity). evm.TU.LG04.2091 GhWRKY6-like gene NM_001398622.1 Gossypium hirsutum cv. Jin668 29027659 Overexpression enhanced salt tolerance; gene acts as positive regulator of salinity responses. evm.TU.LG07.1634 OsARP LOC_Os02g26700.1 Oryza sativa 18420595 Overexpression improved salt tolerance by enhancing tonoplast Na+/H+ exchange and Na+ sequestration. evm.TU.LG09.238 MdMYB46 XM_008365407.4 Malus*domestica 31077628 Overexpression enhanced salt tolerance (positive). evm.TU.LG05.2024 OsTOP6B LOC_Os03g54091.1 Oryza sativa 18071708 Altered expression affected salinity responses; functional gene supports tolerance (positive role). evm.TU.LG07.1367 OsKAT1 LOC_Os01g55200.1 Oryza sativa 17586689 Overexpression improved salt tolerance via K+ homeostasis (positive). evm.TU.LG12.303 SpWRKY1 Solyc06g066380.1 Solanum pimpinellifolium L3708 25496091 Overexpression increased salt tolerance (positive). evm.TU.LG04.1713 MdGRF11 XM_029110326.2 Malus x domestica 31521216 MdGRF11 acts as a positive regulator of salt and drought stress. (positive) evm.TU.LG04.1973 OsSIK2 LOC_Os07g08860.1 Oryza sativa 24143807 Overexpression enhanced salt tolerance (stress-induced kinase; positive). evm.TU.LG05.162 OsMSR2 LOC_Os01g72530.1 Oryza sativa L. 21359958 Overexpression (rice) enhanced salt tolerance. evm.TU.LG07.861 GmJ Glyma.04g050200.1 Glycine max 32256507 Overexpression improved NaCl tolerance; mutant lines were more salt-sensitive (positive regulator). evm.TU.LG10.1582 OsTRE1 LOC_Os10g37660.1 Oryza sativa 30393190 Overexpression increased salt tolerance; trehalase OsTRE1 positively regulates salt response. evm.TU.LG07.1607 OsSIDP366 LOC_Os06g47860.1 Oryza sativa 26172270 Overexpression of OsSIDP366 enhanced salt (and drought) tolerance. evm.TU.LG10.1531 MdLACS4 XM_008343312.4 Malus x domestica 32563467 Apple LACS4 participates in salt response; overexpression lines showed improved salt tolerance. evm.TU.LG12.1052 SlMYB102 Solyc02g079280.2 Solanum lycopersicum 31928668 Overexpression increased salt tolerance (positive regulator). evm.TU.LG03.1414 GmMYB3a XM_003556598.5 Glycine max 29524418 Overexpression improved salt tolerance (positive regulator). evm.TU.LG01.2170 NAC57 Potri.006G144400.1 Populus alba x Populus glandulosa 30233602 Overexpression conferred improved salt tolerance (positive regulator). evm.TU.LG02.2075 OsCOIN LOC_Os01g01420.2 Oryza sativa 17549515 OsCOIN overexpression increased tolerance to cold and salt in rice/Arabidopsis. evm.TU.LG09.766 PtHDT902 XM_006384609.3 Populus trichocarpa 31779889 Overexpression improved salt tolerance (histone deacetylase; positive). evm.TU.LG01.1283 PtRabE1b Potri.008G051700.2 Populus trichocarpa 29914373 Overexpression increased salt tolerance (Rab GTPase; positive). evm.TU.LG07.75 AtOxR AT5G57345.1 Arabidopsis thaliana 27717369 Overexpression improved salt tolerance (oxidation-related protein; positive). evm.TU.LG07.1124 BvM14-glyoxalase I XM_010689973.2 beta vulgaris 23203352 Overexpression improved salt tolerance via methylglyoxal detox (positive). evm.TU.LG01.1188 OsLecRLK LOC_Os04g44900.1 Oryza Sativa 31691262 Overexpression improved salt tolerance (lectin receptor-like kinase; positive). evm.TU.LG07.1146 NADP-ME2 LOC_Os01g52500.1 Oryza sativa 17245561 Overexpression enhanced salt tolerance (malic enzyme-mediated metabolism; positive). evm.TU.LG01.271 VvIAA18 XM_010656314.2 Vitis vinifera 32075333 Overexpression increased salt tolerance (auxin-responsive gene; positive). evm.TU.LG11.1241 GmDi19-5 NM_001251009.2 Glycine max 25852726 Overexpression enhanced salt tolerance (Di19 family; positive). evm.TU.LG11.1420 GS2 LOC_Os04g56400.1 Oryza sativa 10949377 Overexpression improved salt tolerance (glutamine synthetase; osmotic/ROS balance). evm.TU.LG11.1091 OsRH58 LOC_Os01g73900.1 Oryza sativa 30626336 Overexpression increased salt tolerance (DEAD-box RNA helicase; positive). evm.TU.LG08.79 MdLACS2 XM_008389114.4 Malus x domestica 32578855 Overexpression enhanced salt tolerance (lipid metabolism; positive). evm.TU.LG03.105 OsGly I LOC_Os07g46360.1 Oryza sativa 27639962 Overexpression enhanced salt tolerance (glyoxalase I; positive). evm.TU.LG04.146 SlGARS7 Solyc01g090950.2.1 Solanum lycopersicum 31355243 Overexpression enhanced salt tolerance; chloroplast/translation-related function supporting stress response. evm.TU.LG06.1076 EgPHI-1 Eucgr.F00356.1 Eucalyptus globulus 24668632 Overexpression enhanced salt tolerance (phosphate-induced protein; positive). evm.TU.LG05.491 MsOr XM_003605621.4 Medicago sativa L. 30121513 Overexpression increased salt tolerance (ORANGE protein; positive). evm.TU.LG02.1642 PtCYP714A3 Potri.019G064600.1 Populus trichocarpa 26970512 Overexpression improved salt tolerance (cytochrome P450; positive). evm.TU.LG02.1525 ITN1 Os03t0281000-01 Oryza sativa 18643991 Negative regulator: loss-of-function increased NaCl tolerance; overexpression reduced tolerance. evm.TU.LG03.561 OsABAR1 LOC_Os04g44500.1 Oryza sativa 32416343 Overexpression increased salt tolerance (ABA/ABAR-related; positive). evm.TU.LG02.985 OsHAK LOC_Os01g70490.1 Oryza sativa cv. Nipponbare 21084222 K+ transporter; overexpression improved salt tolerance (ion homeostasis; positive). evm.TU.LG05.129 NtPRX63 XM_016584581.2 Nicotiana tabacum 32521442 Overexpression enhanced salt tolerance (peroxidase; positive). evm.TU.LG03.484 OsMIZ1 LOC_Os02g47980.1 Oryza sativa 31786672 Overexpression improved salt tolerance (root hydrotropism/signaling; positive). evm.TU.LG07.1599 OsDHSRP1 LOC_Os02g05692.1 Oryza sativa 32206999 Overexpression improved salt tolerance (stress-related protein; positive). evm.TU.LG09.1205 OsPP108 LOC_Os09g15670.1 Oryza sativa 25886365 Overexpression enhanced salt tolerance (PP2C-type phosphatase; positive). evm.TU.LG02.1755 VvSDIR1 XM_002283112.4 Vitis vinifera 22886312 Overexpression enhanced salt tolerance (grape SDIR1; positive). evm.TU.LG03.803 VlWRKY3 XM_002275540.4 Vitis vinifera 29922304 Overexpression increased salt tolerance (WRKY TF; positive). evm.TU.LG09.946 OsSIZ1 LOC_Os05g03430.1 Oryza sativa 30092010 Overexpression enhanced salt tolerance (SUMO E3 ligase; positive). evm.TU.LG04.1278 OsADF2 NM_001402276.1 Oryza sativa 29851294 Overexpression increased salt tolerance (actin dynamics; positive). evm.TU.LG06.1084 SnRK2.7 XM_024600789.2 Populus trichocarpa 27242819 Overexpression enhanced salt tolerance in Arabidopsis (Poplar PtSnRK2.7; positive). evm.TU.LG02.2278 MdBZR1-2like MDP0000410792 Malus domestica 31827478 Overexpression increased salt tolerance (BZR1-like TF; positive). evm.TU.LG06.621 GsPRX9 Glyma.14G070800.1 Glycine soja 31370221 Overexpression enhanced salt tolerance (peroxidase; positive). evm.TU.LG05.407 JcHDZ07 XM_012226424.3 Jatropha curcas 31379913 Overexpression enhanced salt tolerance (HD-ZIP TF; positive). evm.TU.LG03.306 PdVIK XM_008811351.4 Phoenix dactylifera 32438658 Overexpression enhanced salt tolerance (MAP4K/VIK; positive). evm.TU.LG11.701 LpMYB1 KP966100.1 Lablab purpureus 27565983 Overexpression increased salt tolerance (MYB TF; positive). evm.TU.LG02.2755 MdBBX10 MDP0000598183 Malus domestica 30712230 Overexpression enhanced salt tolerance (B-box TF; positive). evm.TU.LG01.475 CaHsp25.9 XM_016721369.2 Capsicum annuum 31284139 Overexpression increased salt tolerance (small heat shock protein; positive). evm.TU.LG10.121 OsDHODH1 LOC_Os02g50350.1 Oryza sativa 19723241 Overexpression increased salt tolerance (dihydroorotate dehydrogenase; positive). evm.TU.LG01.1876 GmCDPK3 Glyma.02G192700 Glycine max 31775269 Overexpression enhanced salt tolerance (CDPK; positive). evm.TU.LG08.439 OsCDPK7 LOC_Os04g49510.1 Oryza sativa 10929125 Overexpression increased salt tolerance (CDPK; positive). evm.TU.LG06.160 OsCPK12 LOC_Os04g47300.1 Oryza sativa 21883553 Positive regulator: overexpression increased and RNAi decreased salt tolerance. evm.TU.LG10.141 SNAC1 LOC_Os03g60080.1 Oryza sativa 16924117 Overexpression increased salt tolerance in rice (positive). evm.TU.LG02.755 GmSK1 XM_014775219.1 Glycine max 29544210 Overexpression increased salt tolerance (sphingosine kinase; positive). evm.TU.LG01.1224 Osexpa7 LOC_Os03g60720.1 Oryza sativa 31936829 Overexpression increased salt tolerance (expansin; positive). evm.TU.LG09.1323 GhEIN3 GH_A05G0871 Gossypium hirsutum 31491703 Overexpression enhanced salt tolerance (ethylene signaling TF; positive). evm.TU.LG03.2251 OsSIRP2 LOC_Os03g58390.1 Oryza sativa 29285618 Overexpression increased salt tolerance (RING-type/Stress-induced; positive). evm.TU.LG04.1138 TaHsfA6f TraesCS4B02G278100.1 Triticum aestivum L. 32354160 Overexpression increased salt tolerance (HSF; positive). evm.TU.LG04.315 VvGSTF13 XM_002263350.5 Vitis vinifera 30195332 Overexpression increased salt tolerance (GST; positive). evm.TU.LG04.744 Gh_A08G1120 (GH3.5) Gh_A08G1120 Gossypium hirsutum 31337336 Auxin-conjugating enzyme; overexpression improved salt tolerance (positive). evm.TU.LG12.665 GhTOM Gh_A07G0747 Gossypium hirsutum 29649144 Overexpression improved salt tolerance (positive regulator). evm.TU.LG02.1945 GhMYB73 Gh_A11G0440 Gossypium hirsutum 31300139 Overexpression enhanced salt tolerance (positive). evm.TU.LG06.1536 Gh_D06G0281(DTX/MATE) Gh_D06G0281 Gossypium hirsutum 30930923 Overexpression increased salt tolerance (MATE transporter; positive). evm.TU.LG10.1285 GhBASS5 Gh_D12G2214 Gossypium hirsutum 32856159 Negative regulator: overexpression decreased salt tolerance by affecting Na+ homeostasis. evm.TU.LG03.214 MdSUT2.2 MDP0000277235 Malus x domestica 29791976 Overexpression enhanced salt tolerance (positive). evm.TU.LG06.541 MdBZR1 MDP0000157809 Malus domestica 31827478 Overexpression increased salt tolerance (BZR1-like TF; positive). evm.TU.LG06.268 AhHEMA1 XM_025810527.3 Arachis hypogaea 30710795 Overexpression increased salt tolerance; RNAi/silencing reduced tolerance (positive regulator). evm.TU.LG07.426 OsTPS8 LOC_Os08g34580.1 Oryza sativa 30289560 Overexpression improved salt tolerance via trehalose metabolism (positive). evm.TU.LG01.758 PtVP1.1 XM_002331026.1 Populus trichocarpa 25877769 Poplar vacuolar H+ -PPase; overexpression enhanced salt tolerance (positive). evm.TU.LG07.535 GmHKT1 XM_014764887.3 Glycine max 20875056 Overexpression of GmHKT1 significantly enhanced the tolerance of transgenic tobacco plants to salt stress evm.TU.LG01.1230 OsMYB91 LOC_Os12g38400.2 Oryza sativa 26025528 Overexpression improved salt tolerance (positive). evm.TU.LG11.1453 ZmCIPK21 XM_035964784.1 Zea mays 25153634 Overexpression improved salt tolerance (positive). evm.TU.LG06.1061 OsTSD2 LOC_Os02g51860.1 Oryza sativa 30536744 Cell-wall/pectin-related gene; overexpression improved salt tolerance (positive). evm.TU.LG02.2711 ZmUPB15 GRMZM2G136443_P01 Zea mays 30824031 UPB family study; ZmUBP15, ZmUBP16 and ZmUBP19 partially rescue the salt-stress phenotype of ubp16-1. (positive) evm.TU.LG06.1482 PdPTP1 XM_006376258.3 Populus trichocarpa 32033494 Protein tyrosine phosphatase; overexpression improved salt tolerance via ABA signaling (positive). evm.TU.LG02.1922 VrDREB2A NM_001254013.3 Vigna radiata 26646381 Overexpression enhanced salt tolerance (positive). evm.TU.LG10.1235 OsTPP1 LOC_Os02g44230.1 Oryza sativa 18365248 Overexpression increased salt tolerance via trehalose pathway (positive). evm.TU.LG07.950 PtSOS2TD XM_002324615.4 Populus trichocarpa 25641517 Constitutively active SOS2 increased salt tolerance in poplar (positive). evm.TU.LG01.2481 PtSAP13 Potri.006G052200.1 Populus trichocarpa 31744233 Overexpression enhanced salt tolerance (Populus SAP13; positive). evm.TU.LG01.1361 GhSPO11-3 XM_016823967.2 Gossypium hirsutum 30426499 GhSPO11-3 likely respond to salt stress by positively regulating root growth, stomatal response, ROS production and the expression of stress-related genes to cope with adverse conditions in plants evm.TU.LG12.892 GmVOZ1G Glyma.10G068900.11.p Glycine max 32245276 Overexpression increased salt tolerance (VOZ TF; positive). evm.TU.LG12.565 OsGA2ox5 LOC_Os07g01340.1 Oryza sativa 24475234 Overexpression enhanced salt tolerance via GA catabolism (positive). evm.TU.LG01.2942 OsPGK2-P LOC_Os02g07260.1 Oryza sativa 26408146 Ectopic expression of Pokkali phosphoglycerate kinase-2 (OsPGK2-P) improves yield in tobacco plants under salinity stress (positive). evm.TU.LG03.63 OsCCD1 LOC_Os12g44310.1 Oryza sativa 27095404 OsCCD1, a novel small calcium-binding protein with one EF-hand motif, positively regulates osmotic and salt tolerance in rice (positive). evm.TU.LG02.56 CmSKOR XM_008462282.3 Cucumis melo L. 30080639 Overexpression altered K+ transport and improved salt tolerance (positive). evm.TU.LG02.21 CpPSY AF152892.2 Citrus paradisi 23011078 Ectopic expression of a fruit phytoene synthase from Citrus paradisi Macf. promotes abiotic stress tolerance in transgenic tobacco (positive). evm.TU.LG06.1116 OsMADS25 LOC_Os04g23910.1 Oryza sativa 30303953 Overexpression improved salt tolerance (positive). evm.TU.LG07.1521 CaCIPK25 XM_004498761.4 Cicer arietinum 26442004 Overexpression improved salt tolerance (CIPK25; positive). evm.TU.LG05.522 OsClpD1 LOC_Os02g32520.1 Oryza sativa 27457985 Overexpression improved salt tolerance (ClpD1; positive). evm.TU.LG01.2279 OsMDH1 LOC_Os01g61380.1 Oryza sativa 31161713 Overexpression increased salt tolerance via malate/REDOX balance (positive). evm.TU.LG11.71 PpAKR1A XM_024547527.2 Physcomitrella Patens 31739643 Overexpression increased salt tolerance via detoxification of reactive carbonyls (positive). evm.TU.LG01.315 SlTIP2;2 NM_001287367.2 Solanum lycopersicum L. cv. Lichun 25186161 Overexpression improved salt tolerance (tonoplast aquaporin; positive). evm.TU.LG07.1163 GW5L LOC_Os01g09470.1 Oryza sativa 30450718 Negative regulator of salt tolerance in rice; overexpression decreased, knockout increased salt tolerance (negative). evm.TU.LG01.2892 BdPP2CA6 Bradi2g45470.1 Brachypodium distachyon 28293246 PP2C-type phosphatase; overexpression decreased salt tolerance; mutants less sensitive (negative regulator). evm.TU.LG10.1154 GmERF135 Glyma.17g145300.1 Glycine max 31396249 Overexpression improved salt tolerance (positive). evm.TU.LG03.2392 OsRLCK253 LOC_Os08g28710.1 Oryza sativa L. 21534973 Overexpression improved salt tolerance (RLCK; positive). evm.TU.LG05.1297 SlCOMT1 XM_004234980.4 Solanum lycopersicum 30999664 Overexpression increased salt tolerance by lignin/ROS modulation (positive). evm.TU.LG06.543 OsPEX11 LOC_Os03g19010.1 Oryza sativa 27695459 Overexpression enhanced salt tolerance via peroxisome proliferation/ROS control (positive). evm.TU.LG06.1633 ERF76 XM_002306676.2 Populus 27123829 Overexpression improved salt tolerance (Populus ERF76; positive). evm.TU.LG04.1309 PheASR2 PH01001821G0350 Phyllostachys edulis 32563042 Overexpression increased salt tolerance (bamboo ASR; positive). evm.TU.LG10.257 PpAOX XM_001774806.1 Physcomitrella patens 31119292 Overexpression improved salt tolerance (alternative oxidase; positive). evm.TU.LG03.41 OSISAP1 LOC_Os09g31200.1 Oryza sativa 15079051 Overexpression increased salt tolerance (rice SAP; positive). evm.TU.LG09.1333 OsDSR2 LOC_Os01g62200.1 Oryza sativa 24247850 Overexpression enhanced tolerance to salt (rice DSR2; positive). evm.TU.LG02.1924 OsChI1 LOC_Os01g61160.1 Oryza sativa 25218040 Overexpression increased tolerance to salinity (and drought) in Arabidopsis (positive). evm.TU.LG05.1762 VaPAT1 GSVIVT01014570001 Vitis amurensis 26687967 Overexpression enhanced salt tolerance (positive). evm.TU.LG02.1175 IbNFU1 CFIMG_006578RA Ipomoea batatas (L.) Lam. 24695556 Overexpression enhanced salt tolerance (Fe-S cluster assembly; positive). evm.TU.LG06.284 OsITL1 OJ1017C11.3 Oryza sativa 18421420 Overexpression enhanced salt tolerance (positive). evm.TU.LG06.14 TaPLATZ2 XP_044434178.1 Triticum aestivum 39436112 Knockdown of TaPLATZ2 or TaWRKY55 enhances wheat tolerance to saline–alkali stress evm.TU.LG01.1050 TaGPAT6 TraesCS3B02G400000.1 Triticum aestivum 39601645 TaGPAT6 enhances salt tolerance in wheat by synthesizing cutin and suberinmonomers to form adiffusion barrier evm.TU.LG01.2798 TaSGT1 XP_044349155.1 Triticum aestivum 40680787 TaSGT1 increased salt stress tolerance. evm.TU.LG06.617 CibZIP43 XP_042981353.1 Carya illinoinensis 40676503 CibZIP43 positively regulates salt and heat tolerance in pecan. evm.TU.LG03.589 SGAM1 AT1G60770 Arabidopsis thaliana 40633123 sgam1 mutations suppress the salt sensitivity of mns1 mns2 mutants. evm.TU.LG01.624 MNS2 AT3G21160 Arabidopsis thaliana 40633123 sgam1 mutations suppress the salt sensitivity of mns1 mns2 mutants. evm.TU.LG02.2593 JrbZIP40 XP_018837265.1 Juglans regia 40604448 Overexpression of JrbZIP40 in transgenic Arabidopsis seedlings significantly enhanced resistance to salt and drought stress.