Gene ID	Homology gene	Gene ID (homology)	Species	PMID	Description
CQ.Regalona.r1.5BG0014500	ZmMYB3R	XM_008674770.4	Zea mays	30798172	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.6AG0025330	ZmSCE1e	XM_008670775.2	Zea mays	30824044	Overexpression improved salt tolerance (SUMO-conjugating enzyme; positive).
CQ.Regalona.r1.8AG0004610	MbNAC25	NM_001294041.1	Malus baccata	32054040	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.9BG0021290	LeNHX2	NM_001328634.1	Solanum lycopersicum	23550888	Tomato LeNHX2 overexpression increased salt tolerance (better growth/ion homeostasis).
CQ.Regalona.r1.5AG0006830	SlMDHAR	NM_001247084.2	Solanum lycopersium	32900447	Overexpression enhanced salt tolerance (MDHAR; positive).
CQ.Regalona.r1.5BG0019080	SlICE1a	NM_001287789.1	tomato	24184451	Overexpression enhanced salt tolerance (ICE1 homolog; positive).
CQ.Regalona.r1.7BG0014480	PR10a	NM_001288085.1	Solanum tuberosum	23455709	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.7BG0004620	PtHMGR	XM_002316990.2	Populus trichocarpa	31574532	Overexpression increased salt tolerance (isoprenoid pathway; positive).
CQ.Regalona.r1.7AG0008290	AtNDPK2	NM_125726.4	Arabidopsis	25240265	NDPK2 positively contributes to salt tolerance; mutants more sensitive (positive).
CQ.Regalona.r1.2BG0001560	mTERF9	NM_124940.4	Arabidopsis	31850621	mTERF5 acts as a negative regulator; loss-of-function increased salt tolerance.
CQ.Regalona.r1.4AG0010880	CsPNG1	NM_124335.3	Cucumis sativus	32142987	Overexpression increased salt tolerance (peptide:N-glycanase; positive).
CQ.Regalona.r1.1AG0008900	AtTrx-h3	NM_123664.4	Arabidopsis	31901883	Overexpression increased salt tolerance; AtTrx-h2 functions in abiotic stress responses.
CQ.Regalona.r1.1BG0017360	AtDFR	NM_123645.4	Arabidopsis	28444442	Overexpression increased salt tolerance via anthocyanin/ROS control (positive).
CQ.Regalona.r1.2AG0005490	AtTrx-h2	NM_123358.4	Arabidopsis	31901883	Overexpression increased salt tolerance; AtTrx-h2 functions in abiotic stress responses.
CQ.Regalona.r1.4BG0009910	AtACP5	NM_122602.2	Arabidopsis	28642782	Purple acid phosphatase; overexpression increased, and loss-of-function decreased, salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.3BG0005190	SOS3	NM_122333.6	Arabidopsis thaliana	14742879	Loss-of-function is salt hypersensitive; key positive regulator of salt tolerance via SOS pathway.
CQ.Regalona.r1.2AG0004090	AnnAt8	NM_121276.3	Arabidopsis	27135239	Overexpression improved salt tolerance (annexin; positive).
CQ.Regalona.r1.2BG0003970	AtEXP2	NM_120611.3	Arabidopsis	24404203	Overexpression improved germination/seedling vigor under salt (positive).
CQ.Regalona.r1.1BG0009500	EIN2	NM_120406.5	Arabidopsis thaliana	17533512	Loss-of-function mutants are salt-sensitive; functional EIN2 supports tolerance (positive role).
CQ.Regalona.r1.2AG0000540	AtCOL4	NM_122402.3	Arabidopsis	25073793	Overexpression enhanced salt/ABA responses (positive regulator of salt tolerance).
CQ.Regalona.r1.6BG0025450	AtPLAT1	NM_120134.3	Arabidopsis	25757741	Overexpression increased salt tolerance (PLAT domain protein; positive).
CQ.Regalona.r1.7BG0003120	AtCSP2	NM_120029.3	Arabidopsis	26252779	Overexpression improved salt tolerance (cold shock protein; positive).
CQ.Regalona.r1.7BG0004370	AtGluR2	NM_001342335.1	Arabidopsis thaliana	11158446	Overexpression of AtGluR2 renders transgenic plants hypersensitive to K+ and Na+ salt (negative).
CQ.Regalona.r1.4BG0005920	Ath-ALDH3	NM_119588.6	Arabidopsis thaliana	12904208	Overexpression improved salt/oxidative stress tolerance (positive).
CQ.Regalona.r1.7BG0005400	PGDH1	NM_119583.4	Arabidopsis	31779918	Overexpression increased salt tolerance via serine biosynthesis/ROS homeostasis (positive).
CQ.Regalona.r1.8AG0013740	SES1	NM_119097.4	Arabidopsis thaliana	30287478	ER-localized chaperone; mutants salt-sensitive; SES1 positively contributes to salt tolerance.
CQ.Regalona.r1.8BG0015160	AtACS7	NM_118753.3	Arabidopsis thaliana	15699063	Stress-inducible promoter activity under salt; no direct tolerance phenotype tested in this paper.
CQ.Regalona.r1.5AG0007620	DREB1A	NM_118680.2	Arabidopsis thaliana	11387979	rd29A::DREB1A overexpression enhanced salt/drought/cold tolerance; positive regulator.
CQ.Regalona.r1.8BG0007630	HSFA4A	NM_118004.3	Arabidopsis thaliana	24676858	Overexpression improved salt tolerance via ROS management (positive).
CQ.Regalona.r1.6BG0011910	mTERF5	NM_117541.9	Arabidopsis	31850621	mTERF5 acts as a negative regulator; loss-of-function increased salt tolerance.
CQ.Regalona.r1.9AG0000710	AtPTPA	NM_116965.3	Arabidopsis thaliana	25281708	Reduced expression of AtPTPA leads to severe defects in plant development, altered responses to abscisic acid, ethylene, and sodium chloride, and decreased PP2A activity.
CQ.Regalona.r1.5BG0027060	AtHAG1	NM_115318.3	Arabidopsis	30394596	GCN5/Histone acetyltransferase; required for salt tolerance; mutants sensitive (positive contributor).
CQ.Regalona.r1.1AG0020860	AtPUB30	NM_114841.4	Arabidopsis	25410251	Suppression of Arabidopsis AtPUB30 resulted in increased tolerance to salt stress during germination (negative)
CQ.Regalona.r1.5AG0021420	GTR1	NM_114665.4	Arabidopsis thaliana	32563451	GTR1 plays a positive role in lateral root development under salt stress
CQ.Regalona.r1.5AG0013890	AtRDUF1	NM_114529.6	Arabidopsis thaliana	23951086	Overexpression enhanced salt tolerance; mutants more sensitive (E3 ligase; positive).
CQ.Regalona.r1.2AG0005150	AtCYSb	NM_180239.4	Arabidopsis thaliana	18523728	Overexpression increased tolerance to abiotic stress including salt (positive).
CQ.Regalona.r1.7AG0016540	AtAIRP3	NM_111812.4	Arabidopsis thaliana	23696092	Overexpression improved salt tolerance (RING E3 ligase; positive).
CQ.Regalona.r1.4AG0006860	AtLTL1	NM_111300.4	Arabidopsis	16930315	Overexpression increased salt tolerance (lipid transfer-like protein; positive).
CQ.Regalona.r1.2BG0026370	AtbHLH17(AtAIB)	NM_130216.3	Arabidopsis thaliana	22948308	The transgenic lines exhibited enhanced tolerance to NaCl, Mannitol and oxidative stress.(positive)
CQ.Regalona.r1.5BG0000300	nsLTP	NM_130081.5	Arabidopsis	32454178	Required for salt tolerance: mutants are hypersensitive to NaCl; overexpression enhances tolerance.
CQ.Regalona.r1.2AG0010570	AtJUB1	NM_129861.3	Arabidopsis thaliana	31100704	Overexpression increased salt tolerance (NAC; positive).
CQ.Regalona.r1.4AG0017930	MBF1a	NM_129829.4	Zea mays	17234157	MBF1a overexpression elevated salt tolerance in Arabidopsis.
CQ.Regalona.r1.3AG0020760	AtOXS2	NM_129754.4	Arabidopsis thaliana	31889067	Overexpression increased salt tolerance; loss-of-function reduced tolerance (positive).
CQ.Regalona.r1.2AG0022340	AtCaN2	NM_201920.3	Arabidopsis thaliana	30824054	Arabidopsis Ca2+-dependent nuclease AtCaN2 plays a negative role in plant responses to salt stress (negative).
CQ.Regalona.r1.2AG0014170	HsfA2	NM_128173.3	ARabidopsis thaliana	17890230	Overexpression enhanced salt tolerance (HSF; positive).
CQ.Regalona.r1.2AG0001950	AtDBP1	NM_128120.2	Arabidopsis	32342434	Arabidopsis DBP1 modulates ABA/salt responses; altered lines showed changed salt sensitivity.
CQ.Regalona.r1.2AG0023680	PKL	NM_128074.4	Arabidopsis thaliana	31354770	Chromatin remodeler; mutants display altered salt responses; overexpression of PKL-related pathways improves salinity tolerance (positive).
CQ.Regalona.r1.6BG0004460	XERICO	NM_126459.3	Arabidopsis	16792696	XERICO overexpression caused salt-hypersensitive germination; negative for salt at seedling stage.
CQ.Regalona.r1.2AG0023650	AtZFP1	NM_106721.2	Arabidopsis thaliana	25074582	Overexpression increased salt tolerance (C2H2 zinc-finger; positive).
CQ.Regalona.r1.4AG0007100	AtPP2-B11	NM_106660.7	Arabidopsis	26041321	E3/PP2-B11 modulates ion transport and salt response; overexpression improves salt tolerance (positive).
CQ.Regalona.r1.8AG0019610	AtSKIP	NM_106368.5	Arabidopsis thaliana	19765229	Overexpression enhanced salt tolerance via transcriptional regulation (positive).
CQ.Regalona.r1.1BG0012400	Adh	NM_106362.3	Arabidopsis	11987307	
CQ.Regalona.r1.8BG0002130	AtHDG11	NM_105996.4	Arabidopsis thaliana	19132376	Overexpression enhanced salt/drought tolerance (root system changes; positive).
CQ.Regalona.r1.4AG0011850	Patellin1 (PATL1)	NM_105873.3	Arabidopsis	29684208	Overexpression increased salt tolerance (PATL1; positive).
CQ.Regalona.r1.6BG0005130	CRK2	NM_105720.4	Arabidopsis thaliana	31118265	CRK2 is required for tolerance to salinity: crk2 mutants are hypersensitive to salt/osmotic stress, while CRK2 OE enhances tolerance (positive).
CQ.Regalona.r1.5AG0018410	AtPPRT1	NM_105556.5	Arabidopsis	32079457	E3 ligase; overexpression improved salt tolerance; mutants hypersensitive (positive).
CQ.Regalona.r1.5BG0006860	At1g64110	NM_179511.2	Arabidopsis thaliana	23480402	Loss-of-function mutants are salt-sensitive during germination; positive role in salinity tolerance.
CQ.Regalona.r1.8AG0001460	AtSLAH1	NM_104908.4	Arabidopsis thaliana	27340232	Loss/altered function reduced shoot Cl- accumulation and increased salt tolerance (negative regulator of tolerance via Cl- loading).
CQ.Regalona.r1.9AG0012310	AtABCG36	NM_104680.3	Arabidopsis thaliana	20088904	Overexpression improved salt resistance; reduced Na+ accumulation; loss-of-function decreased tolerance (positive).
CQ.Regalona.r1.2BG0000220	AtSIBP1	NM_104452.4	Arabidopsis thaliana	31817461	Overexpression improved salt tolerance (BTB/POZ-type; positive).
CQ.Regalona.r1.7AG0006410	AtALDH7B4	NM_104287.5	Arabidopsis	17080931	Overexpression increased salt tolerance (aldehyde dehydrogenase; positive).
CQ.Regalona.r1.3AG0002970	ABA2	NM_104113.5	Arabidopsis thaliana	17189333	Functional gene positively contributes to salt tolerance; mutants salt-sensitive (ABA biosynthesis).
CQ.Regalona.r1.8BG0013130	MKK4	NM_104044.3	Arabidopsis thaliana	21806969	Overexpression enhanced salt tolerance (MAPKK; positive).
CQ.Regalona.r1.3BG0021100	bHLH122	NM_103993.3	Arabidopsis	24261563	Positive regulator: overexpression increased, knockout decreased salt tolerance.
CQ.Regalona.r1.9AG0016710	AtRab7	NM_103820.4	Arabidopsis thaliana	14657401	Overexpression increased salt tolerance (Rab7; vesicle trafficking).
CQ.Regalona.r1.5BG0002550	MYC2	NM_102998.4	Arabidopsis	31782895	Negative regulator: overexpression reduced salt tolerance, while loss-of-function increased tolerance (ABA-dependent).
CQ.Regalona.r1.5BG0001790	XTH30	NM_102950.4	Arabidopsis thaliana	31257449	negatively affecting salt tolerance (negative).
CQ.Regalona.r1.6AG0009190	AtAGO2	NM_102866.3	Arabidopsis thaliana	31521214	AGO2 positively regulates salt tolerance; ago2 mutants are salt-sensitive.
CQ.Regalona.r1.1BG0007680	AtSAT32	NM_202194.3	Arabidopsis thaliana	19210750	Required for salt tolerance; mutants hypersensitive; positive contributor to salt tolerance.
CQ.Regalona.r1.1AG0015550	AtRabG3e	NM_102121.3	Arabidopsis thaliana	14657401	Overexpression increased salt tolerance (Rab7; vesicle trafficking).
CQ.Regalona.r1.7BG0004090	UGT85A5	NM_202156.2	Arabidopsis thaliana	23533660	Ectopic expression enhanced salt tolerance (higher germination, growth under NaCl).
CQ.Regalona.r1.1BG0003030	FYVE1	NM_101865.4	Arabidopsis thaliana	32540007	overexpression of FYVE1 results in increased sensitivity to salt stress (negative).
CQ.Regalona.r1.8AG0007400	RABA1	NM_101553.3	Arabidopsis thaliana	22974509	RABA1 members are required for salinity stress tolerance.
CQ.Regalona.r1.8BG0008010	AtGSK1	NM_100519.3	Arabidopsis thaliana	11532176	Overexpression conferred NaCl tolerance; positive regulator.
CQ.Regalona.r1.3AG0014780	At5PTase7	NM_100426.5	Arabidopsis thaliana	21677096	Positive regulator: overexpression increased tolerance and mutants were salt-hypersensitive.
CQ.Regalona.r1.3AG0004610	CNGC10	NM_001197956.2	Arabidopsis thaliana	25416933	Ion channel in salt response; functional gene supports salt adaptation; mutants salt-sensitive (positive contributor).
CQ.Regalona.r1.8BG0013190	PGDH2	NM_001035984.2	Arabidopsis	31779918	Overexpression increased salt tolerance via serine biosynthesis/ROS homeostasis (positive).
CQ.Regalona.r1.5AG0005120	AtWNK8	NM_123564.3	Arabidopsis thaliana	23535337	Disruption of AtWNK8 enhances tolerance of Arabidopsis to salt and osmotic stresses (negative).
CQ.Regalona.r1.8AG0016890	SDH	NM_119469.4	Arabidopsis	29125673	Overexpression enhanced salt tolerance (succinate dehydrogenase-linked response; positive).
CQ.Regalona.r1.3BG0025830	UGT75D1	NM_117646.3	Arabidopsis	26496910	Overexpression enhanced salt tolerance (UDP-glycosyltransferase; hormone/ROS modulation).
CQ.Regalona.r1.6AG0006690	PP2A-C5	NM_105665.3	Arabidopsis	27676158	Positive regulator: overexpression increased, knockout decreased salt tolerance.
CQ.Regalona.r1.5AG0010090	NaKR3	NM_001035775.2	Arabidopsis thaliana	26909945	Loss-of-function impaired Na+/K+ homeostasis; functional gene supports salt tolerance.
CQ.Regalona.r1.1BG0000970	HMGB3	NM_001035998.1	Arabidopsis thaliana	17169924	Overexpression caused salt-hypersensitive germination (negative for salt tolerance at seed stage).
CQ.Regalona.r1.2AG0020810	UGT76E11	NM_114534.3	Arabidopsis	28902451	Overexpression improved salt tolerance (UGT; positive).
CQ.Regalona.r1.6BG0028090	AtACS5	NM_125977.2	Arabidopsis thaliana	15699063	Stress-inducible promoter activity under salt; no direct tolerance phenotype tested in this paper.
CQ.Regalona.r1.9AG0004950	PDXII	NM_125447.2	Arabidopsis thaliana	29807600	Overexpression increased salt tolerance (vitamin B6 biosynthesis; positive).
CQ.Regalona.r1.4AG0011680	JMJ15	NM_129041.1	Arabidopsis thaliana	25009544	Overexpression increased salt tolerance; mutants more sensitive (positive).
CQ.Regalona.r1.2AG0011970	GmEF4	NM_001350098.1	Glycine max	31248195	Overexpression enhanced salt tolerance (elongation factor-like; positive).
CQ.Regalona.r1.4BG0012210	SPK-3	NM_001249814.1	Glycine max	9267431	
CQ.Regalona.r1.5BG0014090	GmSALT3	NM_001353420.1	Glycine max	27746805	GmSALT3 confers salt tolerance by improving Na+/Cl- exclusion; overexpression increases tolerance.
CQ.Regalona.r1.4AG0010210	GmWNK1	NM_001377123.1	Glycine max	21925762	Overexpression increased salt tolerance (WNK kinase; positive).
CQ.Regalona.r1.7AG0021730	GmSYP24	NM_001371115.1	Glycine max	30979945	Overexpression improved salt tolerance (membrane trafficking/vesicle protein; positive).
CQ.Regalona.r1.3BG0025120	GmFDL19	NM_001361986.1	Glycine soja	28640834	Overexpression enhanced salt tolerance (bZIP; positive).
CQ.Regalona.r1.4AG0004870	GmGSK	NM_001255732.2	Glycine max	20155384	exhibited enhanced resistance to salt and drought stress (positive).
CQ.Regalona.r1.7AG0001430	GmWRKY49	NM_001317594.1	Glycine max	29997634	Overexpression enhanced salt tolerance (WRKY TF; positive).
CQ.Regalona.r1.2AG0004570	GmCLC1	NM_001249565.2	Glycine max	27504114	Overexpression improved salt tolerance (soybean CLC; positive).
CQ.Regalona.r1.4BG0019540	BrERF4	XM_009137184.3	Brassica rapa	20803085	BrERF4 overexpression enhanced tolerance to salinity and drought.
CQ.Regalona.r1.2AG0000330	MfWRKY17	MT383744.1	Myrothamnus Flabellifolia	32610467	Overexpression increased salt tolerance; positive regulator of salt and drought responses.
CQ.Regalona.r1.3AG0001500	CmCML13	MT340534.1	Cucumis melo	32795909	Overexpression increased salt tolerance (calmodulin-like protein; positive).
CQ.Regalona.r1.7BG0016530	SmPPT	MH707439.1	Salvia miltiorrhiza	31471635	Overexpression increased salt tolerance (phosphoenolpyruvate/phosphate translocator family; positive).
CQ.Regalona.r1.1AG0004350	ZmCPK11	NM_001112282.1	Zea mays	30714160	Overexpression enhanced salt tolerance (CDPK; positive).
CQ.Regalona.r1.1BG0004400	IbARF5	XM_031258613.1	Ipomoea batatas (L.) Lam.)	30254657	Overexpression increased salt tolerance (auxin response factor; positive).
CQ.Regalona.r1.9AG0000530	OsMYB6	MK061534.1	Oryza sativa	30833955	Overexpression increased salt tolerance (MYB TF; positive).
CQ.Regalona.r1.4BG0019230	GsZFP1	XM_028339042.1	Glycine soja	23867600	Overexpression improved salt tolerance (C2H2 zinc finger; positive).
CQ.Regalona.r1.6BG0000010	OsSHMT3	MG799132.1	Oryza sativa	30941150	Overexpression improved salt tolerance via photorespiration/serine-glycine metabolism (positive).
CQ.Regalona.r1.3BG0022830	SpERD15	XM_015218463.2	Solanum pennellii	21576192	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.1BG0005710	SlWRKY8	NM_001346925.1	Solanum lycoperiscum	31017672	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.7BG0024530	PcWRKY33	MG779503.1	Polygonum cuspidatum	29691637	Overexpression conferred salt tolerance (positive regulator).
CQ.Regalona.r1.2AG0003560	ZmGPDH1	MH460963.1	Zea mays	30626322	ZmGPDH1 overexpression improved salt tolerance via glycerolipid metabolism/ROS balance.
CQ.Regalona.r1.3AG0011850	IpLEA	MF680612.1	Ipomoea pes-caprae	31619699	Overexpression enhanced salt tolerance (LEA protein; positive).
CQ.Regalona.r1.5AG0000510	Lm-6-SFT	KU711081.1	Leymus mollis	31159261	Overexpression enhanced salt tolerance by promoting fructan accumulation (positive).
CQ.Regalona.r1.4AG0009420	PtDRS1	MF663784.1	Populus trichocarpa	29494985	RNA helicase-like; overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.6AG0014970	SiGRF4	XM_004952840.4	Setaria italica	32351536	Overexpression increased salt tolerance (14-3-3; positive).
CQ.Regalona.r1.2BG0017800	IbTC	KP306524.1	Ipomoea batatas	31639559	Overexpression increased salt tolerance with higher photosystem II activity and chlorophyll under NaCl.
CQ.Regalona.r1.5AG0010060	AhAL1	KU933956.1	Atriplex hortensis	29426828	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.3BG0018840	SiMYB75	XM_011075424.2	Sesamum indicum	32099638	Overexpression enhanced salt tolerance (MYB TF; positive).
CQ.Regalona.r1.2BG0003100	PpsnRK1α	XM_007215174.2	Prunus persica	32216751	Overexpression (tomato) enhanced salt tolerance (better growth/physiology under NaCl).
CQ.Regalona.r1.3BG0002400	ThDREB	KX418590.1	Tamarix hispida	28222350	Overexpression increased salt tolerance; positive.
CQ.Regalona.r1.3AG0012160	AlTMP2	KY321745.1	Aeluropus littoralis	29450758	Overexpression increased salt tolerance (Aeluropus TMP2; positive).
CQ.Regalona.r1.4AG0008100	SbSRP	KX242114.1	Salicornia brachiata	28473839	Overexpression improved salt tolerance (salt-responsive protein; positive).
CQ.Regalona.r1.2AG0014590	AhFC1	KU560625.1	Arachis hypogaea	30710795	Overexpression increased salt tolerance; RNAi/silencing reduced tolerance (positive regulator).
CQ.Regalona.r1.1BG0004330	PnLRR-RLK27	KX159251.1	Pohlia nutans	28241081	Overexpression enhanced salt tolerance (LRR-RLK; positive).
CQ.Regalona.r1.7BG0014860	TaLEA	DQ663481.2	Tamarix androssowii	23840708	Overexpression increased salt tolerance (wheat LEA; positive).
CQ.Regalona.r1.4AG0004660	TsGOLS2	AF499723.2	Thellungiella salsuginea	23728391	Overexpression enhanced salt tolerance via galactinol/raffinose pathway (positive).
CQ.Regalona.r1.1BG0014430	TaFBA1	JN038382.2	Triticum aestivum L.	28483055	Overexpression increased salt tolerance in transgenic tobacco (F-box protein; positive).
CQ.Regalona.r1.5AG0018150	JcERF2	AP011962.1	Jatropha curcas	25935218	Overexpression increased salt tolerance (ERF TF; positive).
CQ.Regalona.r1.9AG0013190	IbbZIP1	XM_019313632.1	Ipomoea batatas	31183509	Overexpression enhanced salt tolerance (sweetpotato bZIP; positive).
CQ.Regalona.r1.2BG0014140	IcSRO1	XM_019300542.1	Ipomea cairica	32033046	Overexpression lines showed improved salinity tolerance (better germination and seedling performance under NaCl).
CQ.Regalona.r1.9AG0018880	SbMYB44	KJ027517.1	Salicornia brachiata	25986050	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.1BG0010370	PagGIa	KT875324.1	Populus alba x Populus glandulosa	27565626	GIGANTEA homolog; overexpression decreased salt tolerance, knock-down increased tolerance (negative regulator).
CQ.Regalona.r1.8AG0016540	JAZ1	KT312824.1	Gossypium arboreum	32211392	JAZ1 overexpression generally increases salt sensitivity; knockdown enhances tolerance (negative regulator).
CQ.Regalona.r1.5BG0000150	MsHsp23	KM604227.1	Medicago sativa	25049632	Overexpression improved salt tolerance (small HSP; positive).
CQ.Regalona.r1.7AG0008940	Nt-Ub1	DQ830978.2	Tobacco	22187972	Overexpression improved salt tolerance (ubiquitin; positive).
CQ.Regalona.r1.6AG0009400	SRL1	AF249733.1	Arabidopsis	12047626	Expression of Arabidopsis SR-like splicing proteins confers salt tolerance to yeast and transgenic plants (positive).
CQ.Regalona.r1.2BG0011150	MusaNAC042	KU507533.1	Banana	27352311	Overexpression increased salt tolerance in transgenic lines (positive).
CQ.Regalona.r1.7AG0004440	CaKR1	DQ862464.1	Capsicum annuum	17927963	Overexpression increased salt tolerance (aldo-keto reductase; positive).
CQ.Regalona.r1.6AG0003760	MaRGS	KX099868.1	Morus alba	31559897	Overexpression enhanced salt tolerance (regulator of G signaling; positive).
CQ.Regalona.r1.2AG0012670	MaGγ2	KX099867.1	Morus alba L.	30587818	Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator.
CQ.Regalona.r1.7BG0007760	MaGβ	KX099865.1	Morus alba L.	30587818	Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator.
CQ.Regalona.r1.2AG0000210	Morus alba G- Proteins (MaGα )	KX099864.1	Morus alba L.	30587818	Overexpression of Gα subunit improved tolerance to salt and drought stresses; positive regulator.
CQ.Regalona.r1.2AG0023050	SbSLSP	KF111691.1	Salicornia brachiata	27313584	Overexpression enhanced salt tolerance (stress-related protein; positive).
CQ.Regalona.r1.6AG0025560	FtMYB13	KT285533.1	Fagopyrum tataricum	30227384	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.6AG0014130	FtMYB9	KT285530.1	Fagopyrum tataricum	28460279	Overexpression enhanced salt tolerance (MYB TF; positive).
CQ.Regalona.r1.5BG0012010	LcCRTISO	KJ700839.1	Lycium chinense	32174932	Overexpression increased salt tolerance (carotenoid biosynthesis; positive).
CQ.Regalona.r1.9AG0009720	AdDjSKI	KJ658279.1	Arachis diogoi	29807607	Overexpression enhanced salt tolerance (positive regulator).
CQ.Regalona.r1.2AG0006510	SlNAC2	KT740994.1	Solanum lycopersicum	30919132	Overexpression (tomato) enhanced salt tolerance (lower ROS, improved survival).
CQ.Regalona.r1.2BG0026880	BpNAC012	KT344119.1	Betula platyphylla	30530740	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.5AG0027490	StGA2ox1	XM_006359960.2	Solanum tuberosum	30191466	Overexpression increased salt tolerance (GA 2-oxidase; positive).
CQ.Regalona.r1.5BG0006400	GhWRKY41	KJ183064.1	Gossypium hirsutum	26562293	Overexpression enhanced salt tolerance (WRKY TF; positive).
CQ.Regalona.r1.8BG0008090	MdCIPK13	KT336295.1	Malus x domestica	29791976	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.4BG0021470	QR	KP979357.1	Salix matsudana	26541063	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.8AG0000580	HcSCL13	KC686400.1	Halostachys caspica	32240936	Overexpression improved salt tolerance (positive regulator).
CQ.Regalona.r1.7AG0017990	SbMYB15	KP749920.1	Salicornia brachiata	26202734	Overexpression enhanced salt tolerance (MYB TF; positive).
CQ.Regalona.r1.8AG0013200	SlNAC8	KR010360.1	Suaeda liaotungensis	29631006	Overexpression increased salt tolerance in tomato (positive).
CQ.Regalona.r1.9BG0007030	LcPDS	KJ143993.1	Lycium chinense	32174932	Overexpression increased salt tolerance (carotenoid biosynthesis; positive).
CQ.Regalona.r1.3AG0010750	ThZFL	KM434773.1	Tamarix hispida	21327695	Overexpression increased salt tolerance (Tamarix zinc-finger-like; positive).
CQ.Regalona.r1.2AG0010020	EaHSP70	KJ670162.1	Erianthus arundinaceus	25617320	Overexpression enhanced salt tolerance (Eutrema HSP70; positive).
CQ.Regalona.r1.4BG0009480	Cdt-NF-YC1	KF939122.1	Cynodon dactylon * Cynodon transvaalensis	25283804	Overexpression enhanced salt tolerance (NF-YC; positive).
CQ.Regalona.r1.3AG0025270	LbGRP1	GQ398238.1	Limonium bicolor (Bunge) Kuntze	21573794	Overexpression increased salt tolerance (glycine-rich protein; positive).
CQ.Regalona.r1.4BG0010530	LcZDS	KJ174516.1	Lycium chinense	32174932	Overexpression increased salt tolerance (carotenoid biosynthesis; positive).
CQ.Regalona.r1.8BG0021520	TaBASS2	KP638564.1	Triticum aestivum L.	27160076	Overexpression improved salt tolerance by enhancing photorespiratory flux/pyruvate transport (ABA-dependent responses).
CQ.Regalona.r1.7AG0009380	vacuolar ATPase subunit D1	JN107805.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.9AG0017490	vacuolar ATPase subunit A	JN033547.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.4AG0021340	EcbHLH57	KP064138.1	Eleusine coracana	26366726	Overexpression increased salt tolerance (bHLH; positive).
CQ.Regalona.r1.9AG0003760	KcCSD	KP143653.1	Kandelia candel	25657655	Overexpression increased salt tolerance (Cu/Zn-SOD from Kandelia; positive).
CQ.Regalona.r1.8BG0021780	PaMBF1c	KM978992.1	Polytrichastrum alpinum	28744295	Overexpression (PaMBF1c) enhanced salt and osmotic tolerance in Arabidopsis.
CQ.Regalona.r1.1BG0016950	PeJRL	XM_011003496.1	Populus euphratica	30769802	Overexpression improved salt tolerance (jacalin-related lectin; positive).
CQ.Regalona.r1.2AG0005390	PeXTH	XM_011045697.1	Populus euphratica	24085577	Overexpression increased salt tolerance (Populus euphratica XTH; positive).
CQ.Regalona.r1.4AG0020230	PeNAC036	XM_011031134.1	Populus euphratica	28776695	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.4AG0005780	PeNAC045	XM_011024560.1	Populus euphratica	28776695	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.4AG0007070	ChVDE	KM504154.1	Cerasus humilis	31065497	Overexpression improved salt tolerance by enhancing NPQ/photoprotection (positive).
CQ.Regalona.r1.6BG0004150	CaDSR6	KJ858682.1	Capsicum annuum	25234727	Overexpression enhanced salt tolerance (defense-related protein; positive).
CQ.Regalona.r1.6AG0008740	DgWRKY5	KC615359.1	Dendronthema grandiform	28684847	Overexpression increased salt tolerance (WRKY TF; positive).
CQ.Regalona.r1.6BG0024110	DgWRKY2	KC615356.1	Dendranthema grandiflorum	30012947	Overexpression enhanced salt tolerance (chrysanthemum WRKY2; positive).
CQ.Regalona.r1.6BG0026540	MsZEP	KM044311.1	Medicago sativa	26573680	Overexpression increased salt tolerance (alfalfa ZEP; positive).
CQ.Regalona.r1.1BG0013890	SsDREB	KM365208.1	Salcornia brachiata	26504772	Overexpression improved salt tolerance (positive regulator).
CQ.Regalona.r1.8AG0019270	MdHXK1	KF438039.1	Malus domestica Borkh.	29440593	Overexpression enhanced salt tolerance (hexokinase-mediated signaling; positive).
CQ.Regalona.r1.6AG0026690	PeSCL7	KJ511863.1	Populus euphratica	20616154	Overexpression enhanced salt tolerance (GRAS TF; positive).
CQ.Regalona.r1.3AG0000870	TaPUB1	JX307854.1	Triticum aestivum L.	31119835	Overexpression enhanced salt tolerance (U-box E3 ligase; positive).
CQ.Regalona.r1.8AG0006450	GmF6′H1	KJ463390.1	Glycine max	31247427	Overexpression improved salt tolerance via flavonoid pathway (positive).
CQ.Regalona.r1.6BG0025330	CaMIPS2	EU714005.1	Cicer arietinum	23065054	Overexpression enhanced salt tolerance via myo-inositol pathway (positive).
CQ.Regalona.r1.2BG0020900	BcPMI2	JN039346.1	Brassica rapa subsp. chinensis	24430300	Overexpression increased salt tolerance (phosphomannose isomerase; positive).
CQ.Regalona.r1.7BG0025310	StnsLTP1	JX576237.1	Solanum tuberosum	27597854	Overexpression increased salt tolerance (non-specific lipid transfer protein; positive).
CQ.Regalona.r1.7AG0013250	SbUSP	KF164282.1	Salicornia brachiata	24291028	Overexpression enhanced salt tolerance (universal stress protein; positive).
CQ.Regalona.r1.4AG0010730	MsGME	KF935649.1	Medicago sativa	24975731	Overexpression improved salt tolerance via ascorbate biosynthesis (positive).
CQ.Regalona.r1.1AG0011400	JcAPX	KF792062.1	Jatropha curcas	25966262	Overexpression enhanced salt tolerance with lower ROS/MDA; antioxidant enzyme activity increased.
CQ.Regalona.r1.1AG0002330	MnDREB4A	KF678389.1	Morus alba L.	26695076	Overexpression increased salt tolerance (mulberry DREB4A; positive).
CQ.Regalona.r1.8AG0000410	AcHMA1	KF863910.1	Atriplex canescens (Pursh) Nutt.,	25153638	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.6BG0017630	TaPI4KIIγ	KC357689.1	Triticum aestivum	23682116	Overexpression enhanced salt tolerance (PI4K; positive).
CQ.Regalona.r1.5AG0025810	GhWRKY39-1	KF220641.1	Gossypium hirsutum	24337818	Overexpression improved tolerance to salt stress (positive).
CQ.Regalona.r1.5AG0027750	VpSBP16	JX845247.1	Vitis pseudoreticulata	29565279	Overexpression increased salt tolerance (SBP-box TF; positive).
CQ.Regalona.r1.8BG0004420	TPX2	KF701483.1	Nicotiana tabacum	10486568	Overexpression of TPX2 had no effect on wild-type development, but greatly increased the germination rate under high salt or osmotic stress.  (positive).
CQ.Regalona.r1.2AG0014490	NsylCBL10	KF667488.1	Nicotiana sylvestris	26318216	Overexpression improved salt tolerance via better Na+ balance; positive regulator.
CQ.Regalona.r1.2AG0020580	PpGMP	KF586841.1	Pogonatherum paniceum	27442366	Overexpression increased salt tolerance (GDP-mannose pyrophosphorylase; ascorbate pathway; positive).
CQ.Regalona.r1.5BG0022820	ZoCDPK1	KC544003.1	Zingiber officinale	24194837	Overexpression improved salt tolerance (Zoysia CDPK; positive).
CQ.Regalona.r1.1AG0010370	JctAPX	KF560416.1	Jatropha curcas	24368517	Chloroplast/thylakoid APX overexpression increased salt tolerance.
CQ.Regalona.r1.6AG0017380	SbSDR1	KF015229.1	Salicornia brachiata	27550641	Overexpression enhanced salt tolerance (short-chain dehydrogenase/reductase; positive).
CQ.Regalona.r1.1AG0002980	TsPIP1;1	JX133234.1	Thellungiella salsuginea	30061546	Overexpression enhanced salt tolerance (aquaporin; positive).
CQ.Regalona.r1.7BG0020300	LcMYB1	KC154048.1	Leymus chinensis	23800660	Overexpression increased tolerance to salt (and drought) in transgenic plants ( positive).
CQ.Regalona.r1.2BG0016260	TaSIP	HM205107.1	Triticum aestivum L.	23400831	Salt-induced protein; overexpression enhanced salt tolerance.
CQ.Regalona.r1.7AG0006720	PfHSP17.2	JX025006.1	Primula forrestii	30235397	Overexpression (in Arabidopsis) increased tolerance to heat and salt; positive role.
CQ.Regalona.r1.1BG0012460	ThTrx5	KC164769.1	Tamarix hispida	32050573	Overexpression improved salt tolerance (thioredoxin; positive).
CQ.Regalona.r1.1AG0018140	PtrZPT2-1	KC820894.1	Poncirus trifoliata	28818385	Overexpression increased salt tolerance (zinc finger TF; positive).
CQ.Regalona.r1.6BG0004590	GbRLK	KC422776.1	Gossypium barbadense	23915077	Overexpression improved salt tolerance (cotton RLK; positive).
CQ.Regalona.r1.5BG0021890	PttEXPA8	JX986668.1	Populus tomentosa	30797010	Overexpression enhanced salt tolerance (expansin; positive).
CQ.Regalona.r1.8AG0015050	GhMKK1	HQ828075.1	Gossypium hirsutum	23844212	Overexpression in tobacco enhanced salt tolerance; silencing increased sensitivity (positive).
CQ.Regalona.r1.8BG0015930	ThNAC7	JQ974961.1	Tamarix hispida.	31336966	Overexpression increased salt tolerance (Tamarix NAC7; positive).
CQ.Regalona.r1.8BG0005870	ThERF1	KC171627.2	Tamarix hispida	24479715	Overexpression enhanced salt tolerance and activates stress genes.
CQ.Regalona.r1.2AG0010820	GhCIPK6	KC465063.1	Gossypium hirsutum	23660187	Overexpression increased salt tolerance (cotton CIPK6; positive).
CQ.Regalona.r1.6AG0000420	GhWRKY25	JF899343.1	Gossypium hirsutum	26410829	Overexpression enhanced salt tolerance (WRKY TF; positive).
CQ.Regalona.r1.9AG0012630	StDREB1	JN125862.1	Solanum tuberosum	23250722	Overexpression enhanced salt tolerance (potato DREB1; positive).
CQ.Regalona.r1.7BG0003880	MfARL1	JX292786.1	Medicago falcata	23298681	Overexpression increased salt tolerance (ARF-like GTP-binding protein; positive).
CQ.Regalona.r1.8AG0018440	SpAHA1	JX628604.1	Sesuvium portulacastrum	29948367	Overexpression enhanced salt tolerance (PM H+-ATPase; improved ion homeostasis; positive).
CQ.Regalona.r1.6BG0005990	ApKUP4	JN635520.1	Alternanthera philoxeroides	24824834	KUP/HAK transporter; overexpression increased salt tolerance (positive).
CQ.Regalona.r1.3BG0005970	CaHDZ12	JX508649.1	Cicer arietinum	29016956	Overexpression enhanced salt tolerance (HD-ZIP TF; positive).
CQ.Regalona.r1.7BG0024950	HbCIPK2	JN831652.1	Hordeum brevisubulatum	22458849	Overexpression enhanced salt tolerance (CIPK; positive).
CQ.Regalona.r1.6BG0022370	SbSOS1	EU879059.1	Salicornia brachiata	23057782	Overexpression enhanced salt tolerance (SOS1 homolog; positive).
CQ.Regalona.r1.1AG0000480	TaST	AY956330.1	Triticum aestivum	21993814	Salt tolerance-related gene; overexpression increased salt tolerance (positive).
CQ.Regalona.r1.6BG0026810	StDREB2	JN125858.1	Solanum tuberosum	22922109	Overexpression enhanced salt tolerance (potato DREB2; positive).
CQ.Regalona.r1.7BG0023060	ThbZIP1	JX169822.1	Tamarix hispida	24093718	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.9BG0006800	JcERF1	HM776314.1	Jatropha curcas	25540008	Overexpression increased salt tolerance (Jatropha ERF; positive).
CQ.Regalona.r1.9AG0015060	SeVP2	HM490005.1	Salicornia europaea	25920512	Overexpression of vacuolar H+ -PPase improved salt tolerance (positive).
CQ.Regalona.r1.5AG0014580	SbMT-2	JF780913.1	Salicornia brachiata	25340650	Overexpression increased salt tolerance (metallothionein; positive).
CQ.Regalona.r1.7BG0024220	Th2CysPrx	JQ341202.1	Tamarix hispida	32731892	Overexpression increased salt tolerance (2-Cys peroxiredoxin; enhanced ROS detox).
CQ.Regalona.r1.5AG0002300	GhPLATZ1	JQ837703.1	Gossypium hirsutum	30286716	Heterologous expression reduced sensitivity to osmotic and salt stress at germination/seedling stages.
CQ.Regalona.r1.2AG0020910	ThHSP18.3	HQ450392.1	Tamarix hispida	22109899	Overexpression enhanced tolerance to salt and drought; positive role.
CQ.Regalona.r1.9AG0021910	AcPIP2	JN632585.1	Atriplex canescens	25947559	Overexpression increased salt tolerance (aquaporin; water status).
CQ.Regalona.r1.9BG0005280	TaSRG	FJ432082.1	Triticum aestivum	21457711	Overexpression enhanced salt tolerance (salt responsive gene; positive).
CQ.Regalona.r1.1BG0001800	MusaDHN-1	JF320824.1	banana	21671068	Overexpression increased salt tolerance (banana dehydrin; positive).
CQ.Regalona.r1.5AG0004070	MsERF11	JF965421.1	Medicago sativa	22645019	Overexpression enhanced salt tolerance (ERF TF; positive).
CQ.Regalona.r1.4AG0001150	AlSAP	DQ885218.1	Aeluropus littoralis	19838809	Overexpression increased tolerance to multiple stresses including salinity (positive).
CQ.Regalona.r1.6AG0024660	ZmSAPK8	EU531501.1	Zea mays	21638061	Overexpression improved salt tolerance (SnRK2; positive).
CQ.Regalona.r1.2AG0023850	MusaWRKY71	HM640262.1	banana	24116051	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.7BG0011850	SbSI-1	JF965339.1	Salicornia brachiata	21655957	Overexpression improved salt tolerance (sorghum stress-induced gene; positive).
CQ.Regalona.r1.6BG0005890	MdSPDS1	AB072915.3	Malus domestica	17549601	Overexpression increased salt tolerance via polyamine accumulation (positive).
CQ.Regalona.r1.9AG0018040	PtADC	HQ008237.1	Poncirus trifoliata	21282323	Overexpression increased salt tolerance via polyamine biosynthesis (positive).
CQ.Regalona.r1.9AG0019120	K2-NhaD	HQ585057.1	Gossypium hirsutum	31989373	Heterologous expression of Na+/H+ antiporter improved salt tolerance.
CQ.Regalona.r1.7BG0025260	NtLTP4	AB625595.1	Nicotiana tabacum	29891874	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.2BG0025440	IbLEA14	GU369820.1	Ipomoea batatas	21136074	Overexpression increased salt tolerance (LEA14; positive).
CQ.Regalona.r1.2BG0002220	ThIPK2	EF110977.1	Thellungiella halophila	19470090	Overexpression improved salt tolerance (Thellungiella IPK2; positive).
CQ.Regalona.r1.7BG0003310	ThCYP1	AY392408.1	Thellungiella halophila	16972091	Overexpression increased salt tolerance (cyclophilin; positive).
CQ.Regalona.r1.6AG0008980	EaCHS1	FJ913888.2	Eupatorium adenophorum	25632925	Overexpression increased salt tolerance (chalcone synthase; positive).
CQ.Regalona.r1.9BG0005300	AaDREB1	HQ889135.1	Adonis amurensis	27110776	Overexpression increased salt tolerance; positive.
CQ.Regalona.r1.9BG0008250	TaABC1	HM773264.1	Triticum aestivum L.	21115661	Overexpression improved salt tolerance (Atypical kinase; positive).
CQ.Regalona.r1.8AG0014830	MhNPR1	GU183100.1	Malus hupehensis	24407603	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.5BG0022150	GST	AF321437.1	Suaeda salsa	15627705	Overexpression of GST gene accelerates the growth of transgenic Arabidopsis under salt stress (positive).
CQ.Regalona.r1.1BG0015290	CAChi2	AF091235.1	Capsicum annuum	16151843	Overexpression increased salt tolerance (chitinase; positive).
CQ.Regalona.r1.4AG0004650	EsCSP41b	AK352800.1	Eutrema salsugineum	26123393	Chloroplast RNA-processing protein; salt phenotype not clearly specified.
CQ.Regalona.r1.5BG0001460	vacuolar ATPase subunit B1	EF105343.1	Triticum aestivum L.	21344312	Overexpression of V-ATPase B1 improved salt tolerance (enhanced vacuolar H+ pumping).
CQ.Regalona.r1.4BG0003070	vacuolar ATPase subunit H	DQ681104.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.9BG0009960	vacuolar ATPase subunit G	DQ491026.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.5AG0025520	vacuolar ATPase subunit F	DQ486058.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.8AG0022760	ScVP	HQ412514.1	Suaeda corniculata	21762382	Vacuolar H+- PPase from Suaeda; overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.1BG0020470	SbDREB2A	GU809211.1	Salicornia brachiata	25022621	Overexpression improved salt tolerance (positive).
CQ.Regalona.r1.2BG0003220	PutAKT1	GU327382.1	Puccinellia tenuiflora	20532513	Overexpression increased salt tolerance by supporting K+ homeostasis (positive).
CQ.Regalona.r1.7BG0004760	TaCHP	GQ379226.1	Triticum aestivum L.	20639406	Overexpression enhanced salt tolerance (calponin-homology protein; positive).
CQ.Regalona.r1.6BG0021210	CsF3H	AY641730.1	Camellia sinensis	24880475	Overexpression increased salt tolerance, likely via flavonoid-mediated ROS control.
CQ.Regalona.r1.5AG0027730	SbSAMS	AY635050.1	Solanum brevidens	25559387	Overexpression increased salt tolerance via S-adenosylmethionine pathway (positive).
CQ.Regalona.r1.8BG0020560	CAPIP2	AY548742.1	Capsicum annuum	16900319	Aquaporin from pepper; overexpression increased salt tolerance (positive).
CQ.Regalona.r1.9BG0006770	SlAREB	AY530758.1	Solanum lycopersicum	20358223	Overexpression increased salt tolerance (AREB/ABF TF; positive).
CQ.Regalona.r1.7BG0014610	CaERFLP1	AY529642.1	Capsicum annuum L. cv. Pukang	15604665	Overexpression enhanced salt tolerance (ERF-like TF; positive).
CQ.Regalona.r1.6BG0016760	SAMDC	U38527.1	Dianthus caryophyllus	16642382	Overexpression increased salt tolerance via elevated polyamines (positive).
CQ.Regalona.r1.1BG0019960	FAD8	L27158.1	Arabidopsis thaliana	16236147	Omega-3 desaturase; overexpression improved salt tolerance (positive).
CQ.Regalona.r1.5BG0008240	Tbosm	M29279.1	Tobacco	22936305	Osmotin-like protein; overexpression increased salt tolerance.
CQ.Regalona.r1.3AG0023960	GmCaM4	L01433.1	Glycine max	24118726	Overexpression improved salt tolerance (calmodulin; Ca2+ signaling).
CQ.Regalona.r1.7BG0018880	Del	M84913.1	Antirrhinum majus	28335727	Overexpression enhanced salt tolerance in transgenic plants.
CQ.Regalona.r1.1BG0016760	SPCP2	AF242373.1	Ipomoea batatas	20129700	Transgenic Arabidopsis with constitutive SPCP2 expression exhibited higher salt and drought stress tolerance (positive).
CQ.Regalona.r1.2AG0006280	TaNIP	DQ530420.1	Triticum aestivum L.	20360019	Overexpression improved salt tolerance (aquaporin/NIP; positive).
CQ.Regalona.r1.2AG0020600	PvP5CS2	EU407263.1	Phaseolus vulgaris	24371167	Overexpression enhanced salt tolerance via proline accumulation (positive).
CQ.Regalona.r1.8BG0018400	LcSAMDC1	GU580935.1	Leymus chinensis	28178573	Overexpression increased salt tolerance (polyamine biosynthesis; positive).
CQ.Regalona.r1.2BG0018860	TopoII	AY169238.2	Nicotiana tabacum	27630644	Over-expression of Topoisomerase II Enhances Salt Stress Tolerance in Tobacco.(positive)
CQ.Regalona.r1.7AG0016010	MCM6	AY169793.2	Pisum sativum	21365356	Overexpression of MCM6 increased tolerance to salt and osmotic stress in Arabidopsis.
CQ.Regalona.r1.7AG0000730	mcSKD1	AF165422.2	Mesembryanthemum crystallinum (ice plant)	15604658	Overexpression enhanced salt tolerance (AAA-ATPase; positive).
CQ.Regalona.r1.8BG0023840	MCHKT2	AY231175.1	Mesembryanthemum crystallinum	29017432	Overexpression improved salt tolerance in heterologous plants (positive).
CQ.Regalona.r1.3AG0007880	TSRF1	AF494201.1	Solanum lycopersicum	17160455	Overexpression enhanced salt tolerance (ERF TF; positive).
CQ.Regalona.r1.3BG0010620	gly II	AY054407.1	Oryza sativa	14638937	Overexpression of glyoxalase II increased salt tolerance (methylglyoxal detox).
CQ.Regalona.r1.9AG0017840	DsALDP	AF329674.1	Dunaliella salina	20213361	Overexpression improved salt tolerance (aldehyde dehydrogenase-like; positive).
CQ.Regalona.r1.3AG0021600	ACA4	AF200739.1	Arabidopsis thaliana	11115896	increased salt tolerance. (positive)
CQ.Regalona.r1.5AG0026960	ThbZIP1	FJ752700.1	Tamarix hispida	19853962	Overexpression increased salt tolerance (bZIP TF; positive).
CQ.Regalona.r1.6BG0010450	AhCMO	AF270651.1	Atriplex hortensis	12582904	Overexpression enhanced salt tolerance (glycine betaine pathway; positive).
CQ.Regalona.r1.7AG0000380	p68	AF271892.1	Pisum sativum	30622848	RNA helicase; overexpression enhanced salt tolerance (positive regulator).
CQ.Regalona.r1.9BG0016430	AAO	AF233593.1	Cucumis melo	15883131	Overexpression enhanced salt tolerance (oxidase-related; positive).
CQ.Regalona.r1.3BG0007740	gamma-TMT	AF104220.1	Arabidopsis thaliana	20144585	Overexpression increased salt tolerance via elevated tocopherols (positive).
CQ.Regalona.r1.1BG0019370	PFLP	AF039662.1	Capsicum annuum	32750653	Overexpression of plant ferredoxin-like protein promotes salinity tolerance in rice (positive)
CQ.Regalona.r1.6BG0024590	MTD	AF067082.1	Apium graveolens	11725947	
CQ.Regalona.r1.5BG0006600	Tsi1	AF058827.1	Nicotiana tabacum	11340180	Overexpression increased salt tolerance (AP2/ERF-related TF; positive).
CQ.Regalona.r1.2BG0003910	TaMnSOD	AY573576.2	Tamarix androssowi	19830589	Overexpression improved salt tolerance via ROS scavenging (positive).
CQ.Regalona.r1.4BG0015710	PsSEOF-1	GQ478228.1	Pisum sativum	26825595	Overexpression enhanced salt tolerance (F-box/TF-like; positive).
CQ.Regalona.r1.5BG0004160	CaBI-1	FJ719768.1	Capsicum annuum	19524322	Overexpression improved salt tolerance by reducing cell death (Bax inhibitor; positive).
CQ.Regalona.r1.4AG0010950	GmGT-2B	EF221754.1	Glycine max	19730734	Overexpression enhanced salt tolerance (trihelix TF; positive).
CQ.Regalona.r1.6AG0022530	GmGT-2A	EF221753.1	Glycine max	19730734	Overexpression enhanced salt tolerance (trihelix TF; positive).
CQ.Regalona.r1.6BG0007680	SbGSTU	EF373062.1	Salicornia brachiata	21136169	Overexpression increased salt tolerance (tau-class GST; positive).
CQ.Regalona.r1.6AG0024210	AnnBj2	EF028226.1	Brassica juncea	29744759	Overexpression (heterologous) conferred enhanced salt tolerance.
CQ.Regalona.r1.3AG0008050	MdcyMDH	DQ221207.1	Malus x domestica	21236692	Overexpression enhanced salt tolerance (malate dehydrogenase; positive).
CQ.Regalona.r1.4BG0008730	GhZFP1	AY887895.1	Gossypium hirsutum	19402879	Overexpression increased salt tolerance (C2H2-type zinc finger; positive).
CQ.Regalona.r1.8BG0018430	OsICL	EF152575.1	Oryza sativa	31694539	Overexpression increased salt tolerance via glyoxylate cycle (positive).
CQ.Regalona.r1.9BG0003240	RMtATP6	AB055076.1	Oryza sativa	16317034	Mitochondrial ATP synthase subunit study; salt phenotype not clearly specified.
CQ.Regalona.r1.2AG0011390	vacuolar proton-ATPase subunit A	DQ432014.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.5BG0007150	ZmSIMK1	AY433815.1	Zea mays	20339925	Overexpression improved salt/osmotic tolerance (MAPK; positive).
CQ.Regalona.r1.6BG0015970	CARAV1	AF478458.1	Capsicum annuum	16927203	RAV TF; overexpression improved salt tolerance (positive).
CQ.Regalona.r1.7AG0003740	LeGSTU2	AY082341.1	Lycopersicon esculentum	26327625	Overexpression increased salt tolerance (tomato GST; positive).
CQ.Regalona.r1.4BG0002710	AtCYSa	AY084769.1	Arabidopsis thaliana	18523728	Overexpression increased tolerance to abiotic stress including salt (positive).
CQ.Regalona.r1.3AG0023320	MUG13.4	AY059918.1	Arabidopsis thaliana	31521214	AGO2 positively regulates salt tolerance; ago2 mutants are salt-sensitive.
CQ.Regalona.r1.4AG0013610	OsEIL2	AB074971.2	Oryza sativa	25995326	Overexpression increased salt tolerance (ethylene signaling TF; positive).
CQ.Regalona.r1.9AG0014680	CsPLDα	EF363796.2	Cucumis sativus	28439282	Overexpression/activation improved salt tolerance via phospholipase D signaling (positive).
CQ.Regalona.r1.9AG0007250	CaRma1H1	AY513612.2	Capsicum annuum	22555403	Overexpression improved tolerance to drought and high salinity (positive).
CQ.Regalona.r1.1BG0017160	GhMPK2	DQ132852.1	Gossypium hirsutum (Cotton)	21590508	Overexpression increased salt tolerance (cotton MAPK2; positive).
CQ.Regalona.r1.4AG0019750	ThMT3	AB298390.1	Tamarix hispida	20835888	Overexpression enhanced salt tolerance (metallothionein; positive).
CQ.Regalona.r1.1AG0007550	AtRGGA	FM209282.1	Arabidopsis	25783413	Overexpression enhanced salt tolerance (glycine-rich RNA-binding protein; positive).
CQ.Regalona.r1.5AG0003630	GmcBL1	BT092219.1	Glycine max	23044418	Overexpression (soybean CBL1) enhanced plant tolerance to high salinity; positive regulator.
CQ.Regalona.r1.6AG0026370	SlNAGS1	FJ543466.1	Solanum lycopersicum	19357433	Overexpression increased salt tolerance (via arginine/polyamine pathway; positive).
CQ.Regalona.r1.7BG0002950	SbpAPX	EU746400.1	Salicornia brachiata Roxb	24197564	Overexpression increased salt tolerance (seashore paspalum APX; positive).
CQ.Regalona.r1.6AG0022150	SAL1	U40433.1	Arabidopsis thaliana	8721754	Loss-of-function is salt-sensitive; functional SAL1 supports tolerance (positive role).
CQ.Regalona.r1.3BG0021740	Vv-α-gal/SIP	EU543561.1	Vitis vinifera	29150723	Overexpression enhanced salt tolerance (sugar metabolism; positive).
CQ.Regalona.r1.3BG0004590	CaAMP1	AY548741.1	Capsicum annuum	18956212	Overexpression enhanced salt tolerance (antimicrobial peptide; positive).
CQ.Regalona.r1.5AG0023620	TaUBA	DQ211935.1	Triticum aestivum L.	25604990	Overexpression increased salt tolerance (ubiquitin-activating enzyme/ubiquitin pathway; positive).
CQ.Regalona.r1.3AG0011050	ZmMPK5	EU965114.1	Zea mays	23952812	Overexpression enhanced salt tolerance (MAPK; positive).
CQ.Regalona.r1.5BG0001730	CsCCD4b	EU523663.1	Crocus sativus	26595090	Overexpression of  CsCCD4b, in Arabidopsis imparts tolerance to dehydration, salt and oxidative stresses (negative)
CQ.Regalona.r1.7AG0020160	AeMDHAR	EF031032.1	Acanthus ebracteatus	22024734	Overexpression enhanced salt tolerance (MDHAR from halophyte; positive).
CQ.Regalona.r1.3AG0000610	ZmALDH22A1	EU019896.1	Zea mays	18688729	Overexpression enhanced salt tolerance (aldehyde dehydrogenase; positive).
CQ.Regalona.r1.5BG0015770	ZmPEAMT1	AY626156.3	Zea mays	17914189	Overexpression enhanced salt tolerance via phosphoethanolamine methyltransferase pathway (positive).
CQ.Regalona.r1.4AG0014900	SePSY	AY789515.1	Salicornia europaea	18414806	Overexpression enhanced salt tolerance via carotenoid pathway (phytoene synthase; positive).
CQ.Regalona.r1.2BG0025750	GmbZIP78	DQ787043.1	Glycine max	18365246	Overexpression improved salt tolerance; RNAi increased sensitivity.
CQ.Regalona.r1.2AG0013130	GmbZIP62	DQ787039.1	Glycine max	18365246	Overexpression improved salt tolerance; RNAi increased sensitivity.
CQ.Regalona.r1.9AG0005450	CsNMAPK	DQ812086.1	Cucumis. sativus	19888676	Overexpression increased salt tolerance (MAPK; positive).
CQ.Regalona.r1.1AG0009410	vacuolar ATPase subunit c	DQ631550.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.2AG0005610	vacuolar ATPase subunit D	DQ631549.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.3AG0002660	vacuolar ATPase subunit C	DQ631548.1	Triticum aestivum	24498005	Overexpression of V-ATPase subunits (including A) enhanced salt tolerance in Arabidopsis (positive).
CQ.Regalona.r1.8AG0022710	OsMGD	AB112060.1	Oryza sativa	24843077	Overexpression (OsMGD) improved salt tolerance via membrane lipid remodeling.
CQ.Regalona.r1.5BG0006040	OsUGE-1	AB087745.1	Oryza sativa	17566602	Overexpression increased salt tolerance (UDP-galactose 4-epimerase; positive).
CQ.Regalona.r1.2AG0010950	DHAR1	AB037970.1	Oryza sativa	17032619	Overexpression increased salt tolerance via ascorbate recycling (positive).
CQ.Regalona.r1.7BG0015610	Nt107	D10524.1	Nicotiana tabacum	11092907	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.4AG0018070	GhPEPC2	EU032328.1	Gossypium hirsutum	29650157	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.7AG0018490	PgTIP1	DQ237285.1	Panax ginseng	17443343	Overexpression increased salt tolerance (transgenic plants had better growth/vigor under NaCl via enhanced vacuolar Na+ sequestration).
CQ.Regalona.r1.5AG0004290	GmDREB6	EF551166.1	Glycine max	31873128	Overexpression enhanced salt tolerance (soybean; positive).
CQ.Regalona.r1.5BG0024100	VpALDH2B4	DQ150256.1	Vitis pseudoreticulata	22437646	Overexpression increased salt tolerance (aldehyde dehydrogenase; positive).
CQ.Regalona.r1.1BG0011200	WsSGTL1	DQ356887.1	Withania somnifera	23646175	Overexpression increased salt tolerance (sterol glucosyltransferase; positive).
CQ.Regalona.r1.6BG0011780	CaRFP1	AY775334.1	Capsicum annuum	17149652	Overexpression increased salt tolerance (RING-finger protein; positive).
CQ.Regalona.r1.5AG0008390	NnGPX	EF421198.1	Nelumbo nucifera L.	24715609	Overexpression enhanced salt tolerance (glutathione peroxidase; positive).
CQ.Regalona.r1.3AG0022460	SeLCY	AY789516.1	Salicornia europaea L.	21471119	Overexpression enhanced salt tolerance via carotenoid pathway (positive).
CQ.Regalona.r1.8BG0005750	CaSBP12	EF141196.1	Capsicum annuum	31936712	Overexpression enhanced salt tolerance (positive regulator).
CQ.Regalona.r1.9AG0005430	cytAPX	X62077.1	Spinacia oleracea	23750614	Overexpression of cytosolic APX increased salt tolerance (positive).
CQ.Regalona.r1.6AG0016820	CaMADS	DQ999998.1	Capsicum annuum	30823994	Overexpression increased salt tolerance (MADS TF; positive).
CQ.Regalona.r1.6AG0009790	GmPHD5	DQ973810.1	Glycine max	19789627	Overexpression increased salt tolerance (PHD-finger TF; positive).
CQ.Regalona.r1.7AG0006010	GmPHD4	DQ973809.1	Glycine max	19789627	Overexpression increased salt tolerance (PHD-finger TF; positive).
CQ.Regalona.r1.1AG0023730	CAbZIP1	AY775332.1	Capsicum annuum	16718483	Overexpression enhanced salt (and drought) tolerance (pepper bZIP1; positive).
CQ.Regalona.r1.4AG0014950	GmMYB177	DQ822925.1	Glycine max	18725908	Overexpression increased salt tolerance (MYB TF; positive).
CQ.Regalona.r1.1AG0004850	GmMYB92	DQ822903.1	Glycine max	18725908	Overexpression increased salt tolerance (MYB TF; positive).
CQ.Regalona.r1.5BG0023500	BADH	DQ497233.1	Atriplex hortensi	20229301	Overexpression increased salt tolerance (betaine aldehyde dehydrogenase; positive).
CQ.Regalona.r1.9AG0009730	CaWRKY27	DQ102364.1	Capsicum annuum	31665666	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.2BG0018150	Pj Rab7	Z73943.1	Prosopis juliflora	20862551	Overexpression increased salt tolerance (Rab7; vesicle trafficking).
CQ.Regalona.r1.4AG0015720	AhNCED1	AJ574819.2	Arachis hypogea	16870153	Overexpression increased salt tolerance via ABA biosynthesis (positive).
CQ.Regalona.r1.1BG0019120	DcHsp17.7	X53851.1	Daucus carota L.	21539946	Overexpression increased salt tolerance in transgenic plants; positive role under abiotic stress.
CQ.Regalona.r1.8AG0013490	PDH45	Y17186.1	Pisum sativum	21847021	Overexpression enhanced salt tolerance (pea DNA helicase; positive).
CQ.Regalona.r1.9BG0018070	Gly I	Y13239.1	Brassica juncea	10205896	Overexpression increased salt tolerance (glyoxalase I; positive).
CQ.Regalona.r1.4BG0014740	ZmNADP-MDH	X16084.1	Zea mays	28942523	Overexpression improved salt tolerance via redox/malate shuttle (positive).
CQ.Regalona.r1.4AG0009650	cytsod	X53872.1	Spinacia oleracea	23750614	Overexpression of cytosolic APX increased salt tolerance (positive).
CQ.Regalona.r1.1BG0001240	GhCAT1	X52135.1	Gossypium hirsutum	23335985	Overexpression increased salt tolerance via enhanced H2O2 scavenging (positive).
CQ.Regalona.r1.1BG0010870	TaPRX-2A	AJ878510.1	Triticum aestivum	32847515	Overexpression enhanced salt tolerance via ROS-scavenging; knockdown reduced tolerance.
CQ.Regalona.r1.6AG0015510	Atppc4	AJ532903.1	Arabidopsis	16283377	
CQ.Regalona.r1.1AG0001630	BveIF1A	AJ251896.1	Beta vulgaris	12713533	Overexpression of eIF1A enhanced salt tolerance (positive).
CQ.Regalona.r1.6BG0027470	BvCKA2	AJ251895.1	Beta vulgaris	11725943	Expression in yeast complemented salt-sensitive growth; suggests contribution to salt tolerance.
CQ.Regalona.r1.4BG0007410	TaCRT1	AY836753.1	Triticum aestivum L.	26469859	Overexpression increased salt tolerance (calreticulin; Ca2+-related).
CQ.Regalona.r1.9BG0006170	RelA/SpoT	AB079577.1	Suaeda japonica	12552141	Heterologous expression (ppGpp pathway) conferred improved salt/drought tolerance in plants (positive).
CQ.Regalona.r1.6BG0015950	AOC	AB037929.2	Bruguiera sexangula	12198193	enhanced salt tolerance.(positive)
CQ.Regalona.r1.4AG0009710	AgNHX1	AB038492.1	Atriplex gmelini	12482579	Overexpression increased salt tolerance (vacuolar Na+/H+ antiporter; positive).
CQ.Regalona.r1.8AG0016410	AtRH17	AJ010468.1	Arabidopsis thaliana	30486488	AtRH17 (DEAD-box RNA helicase) overexpression improved salt stress tolerance.
CQ.Regalona.r1.8AG0001430	GhWRKY6-like gene	NM_001398622.1	Gossypium hirsutum cv. Jin668	29027659	Overexpression enhanced salt tolerance; gene acts as positive regulator of salinity responses.
CQ.Regalona.r1.2AG0013010	OsARP	LOC_Os02g26700.1	Oryza sativa	18420595	Overexpression improved salt tolerance by enhancing tonoplast Na+/H+ exchange and Na+ sequestration.
CQ.Regalona.r1.4AG0001450	MdMYB46	XM_008365407.4	Malus*domestica	31077628	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.2BG0001380	OsTOP6B	LOC_Os03g54091.1	Oryza sativa	18071708	Altered expression affected salinity responses; functional gene supports tolerance (positive role).
CQ.Regalona.r1.3BG0002390	OsKAT1	LOC_Os01g55200.1	Oryza sativa	17586689	Overexpression improved salt tolerance via K+ homeostasis (positive).
CQ.Regalona.r1.4BG0008270	SpWRKY1	Solyc06g066380.1	Solanum pimpinellifolium L3708	25496091	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.9AG0008280	MdGRF11	XM_029110326.2	Malus x domestica	31521216	MdGRF11 acts as a positive regulator of salt and drought stress. (positive)
CQ.Regalona.r1.9BG0015740	OsSIK2	LOC_Os07g08860.1	Oryza sativa	24143807	Overexpression enhanced salt tolerance (stress-induced kinase; positive).
CQ.Regalona.r1.2AG0008820	OsMSR2	LOC_Os01g72530.1	Oryza sativa L.	21359958	Overexpression (rice) enhanced salt tolerance.
CQ.Regalona.r1.2BG0016930	GmJ	Glyma.04g050200.1	Glycine max	32256507	Overexpression improved NaCl tolerance; mutant lines were more salt-sensitive (positive regulator).
CQ.Regalona.r1.5AG0005220	OsTRE1	LOC_Os10g37660.1	Oryza sativa	30393190	Overexpression increased salt tolerance; trehalase OsTRE1 positively regulates salt response.
CQ.Regalona.r1.2AG0013350	OsSIDP366	LOC_Os06g47860.1	Oryza sativa	26172270	Overexpression of OsSIDP366 enhanced salt (and drought) tolerance.
CQ.Regalona.r1.5BG0006190	MdLACS4	XM_008343312.4	Malus x domestica	32563467	Apple LACS4 participates in salt response; overexpression lines showed improved salt tolerance.
CQ.Regalona.r1.8BG0003930	SlMYB102	Solyc02g079280.2	Solanum lycopersicum	31928668	Overexpression increased salt tolerance (positive regulator).
CQ.Regalona.r1.2BG0020200	GmMYB3a	XM_003556598.5	Glycine max	29524418	Overexpression improved salt tolerance (positive regulator).
CQ.Regalona.r1.9AG0011910	NAC57	Potri.006G144400.1	Populus alba x Populus glandulosa	30233602	Overexpression conferred improved salt tolerance (positive regulator).
CQ.Regalona.r1.4AG0014280	OsCOIN	LOC_Os01g01420.2	Oryza sativa	17549515	OsCOIN overexpression increased tolerance to cold and salt in rice/Arabidopsis.
CQ.Regalona.r1.7AG0019570	PtHDT902	XM_006384609.3	Populus trichocarpa	31779889	Overexpression improved salt tolerance (histone deacetylase; positive).
CQ.Regalona.r1.7AG0002300	PtRabE1b	Potri.008G051700.2	Populus trichocarpa	29914373	Overexpression increased salt tolerance (Rab GTPase; positive).
CQ.Regalona.r1.8AG0018420	AtOxR	AT5G57345.1	Arabidopsis thaliana	27717369	Overexpression improved salt tolerance (oxidation-related protein; positive).
CQ.Regalona.r1.8AG0019730	BvM14-glyoxalase I	XM_010689973.2	beta vulgaris	23203352	Overexpression improved salt tolerance via methylglyoxal detox (positive).
CQ.Regalona.r1.2AG0020440	OsLecRLK	LOC_Os04g44900.1	Oryza Sativa	31691262	Overexpression improved salt tolerance (lectin receptor-like kinase; positive).
CQ.Regalona.r1.8BG0022880	NADP-ME2	LOC_Os01g52500.1	Oryza sativa	17245561	Overexpression enhanced salt tolerance (malic enzyme-mediated metabolism; positive).
CQ.Regalona.r1.4BG0007710	GmDi19-5	NM_001251009.2	Glycine max	25852726	Overexpression enhanced salt tolerance (Di19 family; positive).
CQ.Regalona.r1.3BG0016760	GS2	LOC_Os04g56400.1	Oryza sativa	10949377	Overexpression improved salt tolerance (glutamine synthetase; osmotic/ROS balance).
CQ.Regalona.r1.3AG0014230	OsRH58	LOC_Os01g73900.1	Oryza sativa	30626336	Overexpression increased salt tolerance (DEAD-box RNA helicase; positive).
CQ.Regalona.r1.9AG0016180	MdLACS2	XM_008389114.4	Malus x domestica	32578855	Overexpression enhanced salt tolerance (lipid metabolism; positive).
CQ.Regalona.r1.5BG0026690	OsGly I	LOC_Os07g46360.1	Oryza sativa	27639962	Overexpression enhanced salt tolerance (glyoxalase I; positive).
CQ.Regalona.r1.7AG0011940	GsGSTU13	NM_001251792.3	Glycine soja	26010993	Overexpression increased salt tolerance (glutathione S-transferase; positive).
CQ.Regalona.r1.5AG0000200	SlGARS7	Solyc01g090950.2.1	Solanum lycopersicum	31355243	Overexpression enhanced salt tolerance; chloroplast/translation-related function supporting stress response.
CQ.Regalona.r1.7BG0004150	EgPHI-1	Eucgr.F00356.1	Eucalyptus globulus	24668632	Overexpression enhanced salt tolerance (phosphate-induced protein; positive).
CQ.Regalona.r1.2AG0009270	MsOr	XM_003605621.4	Medicago sativa L.	30121513	Overexpression increased salt tolerance (ORANGE protein; positive).
CQ.Regalona.r1.2AG0005280	PtCYP714A3	Potri.019G064600.1	Populus trichocarpa	26970512	Overexpression improved salt tolerance (cytochrome P450; positive).
CQ.Regalona.r1.2AG0011150	ITN1	Os03t0281000-01	Oryza sativa	18643991	Negative regulator: loss-of-function increased NaCl tolerance; overexpression reduced tolerance.
CQ.Regalona.r1.9BG0021780	OsABAR1	LOC_Os04g44500.1	Oryza sativa	32416343	Overexpression increased salt tolerance (ABA/ABAR-related; positive).
CQ.Regalona.r1.7AG0013860	OsHAK	LOC_Os01g70490.1	Oryza sativa cv. Nipponbare	21084222	K+ transporter; overexpression improved salt tolerance (ion homeostasis; positive).
CQ.Regalona.r1.2AG0009410	NtPRX63	XM_016584581.2	Nicotiana tabacum	32521442	Overexpression enhanced salt tolerance (peroxidase; positive).
CQ.Regalona.r1.6AG0015460	OsMIZ1	LOC_Os02g47980.1	Oryza sativa	31786672	Overexpression improved salt tolerance (root hydrotropism/signaling; positive).
CQ.Regalona.r1.9BG0002250	OsPP108	LOC_Os09g15670.1	Oryza sativa	25886365	Overexpression enhanced salt tolerance (PP2C-type phosphatase; positive).
CQ.Regalona.r1.2AG0020360	VvSDIR1	XM_002283112.4	Vitis vinifera	22886312	Overexpression enhanced salt tolerance (grape SDIR1; positive).
CQ.Regalona.r1.5AG0017190	VlWRKY3	XM_002275540.4	Vitis vinifera	29922304	Overexpression increased salt tolerance (WRKY TF; positive).
CQ.Regalona.r1.4BG0016860	ZmUPB19	XP_008679796.1	Zea mays	30824031	UPB family study;  ZmUBP15, ZmUBP16 and ZmUBP19 partially rescue the salt-stress phenotype of ubp16-1. (positive)
CQ.Regalona.r1.9BG0017160	OsSIZ1	LOC_Os05g03430.1	Oryza sativa	30092010	Overexpression enhanced salt tolerance (SUMO E3 ligase; positive).
CQ.Regalona.r1.5BG0027850	OsADF2	NM_001402276.1	Oryza sativa	29851294	Overexpression increased salt tolerance (actin dynamics; positive).
CQ.Regalona.r1.1BG0014470	SnRK2.7	XM_024600789.2	Populus trichocarpa	27242819	Overexpression enhanced salt tolerance in Arabidopsis (Poplar PtSnRK2.7; positive).
CQ.Regalona.r1.6AG0018680	NtSnRK2.2	XM_009593458.4	Tobacco	32336321	Overexpression enhanced salt tolerance in tobacco (positive).
CQ.Regalona.r1.6BG0019080	MdBZR1-2like	MDP0000410792	Malus domestica	31827478	Overexpression increased salt tolerance (BZR1-like TF; positive).
CQ.Regalona.r1.1BG0017040	GsPRX9	Glyma.14G070800.1	Glycine soja	31370221	Overexpression enhanced salt tolerance (peroxidase; positive).
CQ.Regalona.r1.5BG0022710	JcHDZ07	XM_012226424.3	Jatropha curcas	31379913	Overexpression enhanced salt tolerance (HD-ZIP TF; positive).
CQ.Regalona.r1.6AG0000640	PdVIK	XM_008811351.4	Phoenix dactylifera	32438658	Overexpression enhanced salt tolerance (MAP4K/VIK; positive).
CQ.Regalona.r1.7BG0009920	CaHsp25.9	XM_016721369.2	Capsicum annuum	31284139	Overexpression increased salt tolerance (small heat shock protein; positive).
CQ.Regalona.r1.2BG0012860	OsDHODH1	LOC_Os02g50350.1	Oryza sativa	19723241	Overexpression increased salt tolerance (dihydroorotate dehydrogenase; positive).
CQ.Regalona.r1.6AG0024080	MdDREB76	MDP0000683814	Malus * domestica	30511183	Overexpression enhanced salt tolerance (DREB TF; positive).
CQ.Regalona.r1.4BG0015470	GmCDPK3	Glyma.02G192700	Glycine max	31775269	Overexpression enhanced salt tolerance (CDPK; positive).
CQ.Regalona.r1.9AG0020230	OsCDPK7	LOC_Os04g49510.1	Oryza sativa	10929125	Overexpression increased salt tolerance (CDPK; positive).
CQ.Regalona.r1.6BG0020420	GmSK1	XM_014775219.1	Glycine max	29544210	Overexpression increased salt tolerance (sphingosine kinase; positive).
CQ.Regalona.r1.1BG0018440	Osexpa7	LOC_Os03g60720.1	Oryza sativa	31936829	Overexpression increased salt tolerance (expansin; positive).
CQ.Regalona.r1.8AG0022080	GhEIN3	GH_A05G0871	Gossypium hirsutum	31491703	Overexpression enhanced salt tolerance (ethylene signaling TF; positive).
CQ.Regalona.r1.5AG0025310	TaHsfA6f	TraesCS4B02G278100.1	Triticum aestivum L.	32354160	Overexpression increased salt tolerance (HSF; positive).
CQ.Regalona.r1.7BG0015710	VvGSTF13	XM_002263350.5	Vitis vinifera	30195332	Overexpression increased salt tolerance (GST; positive).
CQ.Regalona.r1.1AG0001850	Gh_A08G1120 (GH3.5)	Gh_A08G1120	Gossypium hirsutum	31337336	Auxin-conjugating enzyme; overexpression improved salt tolerance (positive).
CQ.Regalona.r1.8AG0008860	GhTOM	Gh_A07G0747	Gossypium hirsutum	29649144	Overexpression improved salt tolerance (positive regulator).
CQ.Regalona.r1.1BG0014740	Gh_D06G0281(DTX/MATE)	Gh_D06G0281	Gossypium hirsutum	30930923	Overexpression increased salt tolerance (MATE transporter; positive).
CQ.Regalona.r1.5AG0008900	GhBASS5	Gh_D12G2214	Gossypium hirsutum	32856159	Negative regulator: overexpression decreased salt tolerance by affecting Na+ homeostasis.
CQ.Regalona.r1.6AG0001540	MdSUT2.2	MDP0000277235	Malus x domestica	29791976	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.1BG0004050	AhHEMA1	XM_025810527.3	Arachis hypogaea	30710795	Overexpression increased salt tolerance; RNAi/silencing reduced tolerance (positive regulator).
CQ.Regalona.r1.1BG0017010	OsBIHD1	LOC_Os03g47740.1	Oryza sativa	16105854	overexpressing OsBIHD1 showed enhanced sensitivity to salt and oxidative stress (positive).
CQ.Regalona.r1.5BG0024070	OsTPS8	LOC_Os08g34580.1	Oryza sativa	30289560	Overexpression improved salt tolerance via trehalose metabolism (positive).
CQ.Regalona.r1.7BG0002020	GmHKT1	XM_014764887.3	Glycine max	20875056	Overexpression of GmHKT1 significantly enhanced the tolerance of transgenic tobacco plants to salt stress
CQ.Regalona.r1.5BG0010640	OsMYB91	LOC_Os12g38400.2	Oryza sativa	26025528	Overexpression improved salt tolerance (positive).
CQ.Regalona.r1.3AG0012420	ZmCIPK21	XM_035964784.1	Zea mays	25153634	Overexpression improved salt tolerance (positive).
CQ.Regalona.r1.1BG0014280	OsTSD2	LOC_Os02g51860.1	Oryza sativa	30536744	Cell-wall/pectin-related gene;  overexpression improved salt tolerance (positive).
CQ.Regalona.r1.1AG0010600	ZmUPB15	GRMZM2G136443_P01	Zea mays	30824031	UPB family study;  ZmUBP15, ZmUBP16 and ZmUBP19 partially rescue the salt-stress phenotype of ubp16-1. (positive)
CQ.Regalona.r1.2BG0028230	PdPTP1	XM_006376258.3	Populus trichocarpa	32033494	Protein tyrosine phosphatase; overexpression improved salt tolerance via ABA signaling (positive).
CQ.Regalona.r1.5AG0000490	OsTPP1	LOC_Os02g44230.1	Oryza sativa	18365248	Overexpression increased salt tolerance via trehalose pathway (positive).
CQ.Regalona.r1.8BG0020420	PtSOS2TD	XM_002324615.4	Populus trichocarpa	25641517	Constitutively active SOS2 increased salt tolerance in poplar (positive).
CQ.Regalona.r1.3BG0021790	PtSAP13	Potri.006G052200.1	Populus trichocarpa	31744233	Overexpression enhanced salt tolerance (Populus SAP13; positive).
CQ.Regalona.r1.7AG0017930	GhSPO11-3	XM_016823967.2	Gossypium hirsutum	30426499	GhSPO11-3 likely respond to salt stress by positively regulating root growth, stomatal response, ROS production and the expression of stress-related genes to cope with adverse conditions in plants
CQ.Regalona.r1.8AG0006000	GmVOZ1G	Glyma.10G068900.11.p	Glycine max	32245276	Overexpression increased salt tolerance (VOZ TF; positive).
CQ.Regalona.r1.8BG0002300	OsGA2ox5	LOC_Os07g01340.1	Oryza sativa	24475234	Overexpression enhanced salt tolerance via GA catabolism (positive).
CQ.Regalona.r1.2AG0008940	OsPGK2-P	LOC_Os02g07260.1	Oryza sativa	26408146	Ectopic expression of Pokkali phosphoglycerate kinase-2 (OsPGK2-P) improves yield in tobacco plants under salinity stress (positive).
CQ.Regalona.r1.2BG0008230	ONAC063	LOC_Os08g33910.1	Oryza sativa	19225807	Overexpression increased salt tolerance (rice NAC; positive).
CQ.Regalona.r1.2BG0018730	OsCCD1	LOC_Os12g44310.1	Oryza sativa	27095404	OsCCD1, a novel small calcium-binding protein with one EF-hand motif, positively regulates osmotic and salt tolerance in rice (positive).
CQ.Regalona.r1.8AG0008680	GmWRKY16	XM_003518461.5	Glycine max	30740122	Overexpression increased salt tolerance (soybean WRKY16; positive).
CQ.Regalona.r1.2BG0009720	CmSKOR	XM_008462282.3	Cucumis melo L.	30080639	Overexpression altered K+ transport and improved salt tolerance (positive).
CQ.Regalona.r1.7BG0001130	OsMADS25	LOC_Os04g23910.1	Oryza sativa	30303953	Overexpression improved salt tolerance (positive).
CQ.Regalona.r1.9AG0024290	CaCIPK25	XM_004498761.4	Cicer arietinum	26442004	Overexpression improved salt tolerance (CIPK25; positive).
CQ.Regalona.r1.5AG0017940	OsClpD1	LOC_Os02g32520.1	Oryza sativa	27457985	Overexpression improved salt tolerance (ClpD1; positive).
CQ.Regalona.r1.8BG0009730	OsMDH1	LOC_Os01g61380.1	Oryza sativa	31161713	Overexpression increased salt tolerance via malate/REDOX balance (positive).
CQ.Regalona.r1.3BG0025490	PpAKR1A	XM_024547527.2	Physcomitrella Patens	31739643	Overexpression increased salt tolerance via detoxification of reactive carbonyls (positive).
CQ.Regalona.r1.5BG0018990	SlbHLH22	Solyc03g097820.1.1	Solanum lycopersicum	31231412	Overexpression increased salt tolerance in tomato (positive).
CQ.Regalona.r1.9BG0009750	SlTIP2;2	NM_001287367.2	Solanum lycopersicum L. cv. Lichun	25186161	Overexpression improved salt tolerance (tonoplast aquaporin; positive).
CQ.Regalona.r1.8AG0019230	GW5L	LOC_Os01g09470.1	Oryza sativa	30450718	Negative regulator of salt tolerance in rice; overexpression decreased, knockout increased salt tolerance (negative).
CQ.Regalona.r1.3BG0004740	BdPP2CA6	Bradi2g45470.1	Brachypodium distachyon	28293246	PP2C-type phosphatase; overexpression decreased salt tolerance; mutants less sensitive (negative regulator).
CQ.Regalona.r1.5AG0004080	GmERF135	Glyma.17g145300.1	Glycine max	31396249	Overexpression improved salt tolerance (positive).
CQ.Regalona.r1.3AG0006370	SlCOMT1	XM_004234980.4	Solanum lycopersicum	30999664	Overexpression increased salt tolerance by lignin/ROS modulation (positive).
CQ.Regalona.r1.7AG0016580	MpPIP2;1	XM_008365285.4	Malus domestica	31362376	Overexpression increased salt tolerance (positive).
CQ.Regalona.r1.9AG0016380	OsPEX11	LOC_Os03g19010.1	Oryza sativa	27695459	Overexpression enhanced salt tolerance via peroxisome proliferation/ROS control (positive).
CQ.Regalona.r1.1BG0010970	ERF76	XM_002306676.2	Populus	27123829	Overexpression improved salt tolerance (Populus ERF76; positive).
CQ.Regalona.r1.5BG0001130	PpAOX	XM_001774806.1	Physcomitrella patens	31119292	Overexpression improved salt tolerance (alternative oxidase; positive).
CQ.Regalona.r1.9BG0003450	OsDSR2	LOC_Os01g62200.1	Oryza sativa	24247850	Overexpression enhanced tolerance to salt (rice DSR2; positive).
CQ.Regalona.r1.1BG0020490	OsChI1	LOC_Os01g61160.1	Oryza sativa	25218040	Overexpression increased tolerance to salinity (and drought) in Arabidopsis (positive).
CQ.Regalona.r1.4AG0021090	VaPAT1	GSVIVT01014570001	Vitis amurensis	26687967	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.5BG0013730	IbNFU1	CFIMG_006578RA	Ipomoea batatas (L.) Lam.	24695556	Overexpression enhanced salt tolerance (Fe-S cluster assembly; positive).
CQ.Regalona.r1.1BG0004890	OsITL1	OJ1017C11.3	Oryza sativa	18421420	Overexpression enhanced salt tolerance (positive).
CQ.Regalona.r1.2BG0024960	TaGPAT6	TraesCS3B02G400000.1	Triticum aestivum	39601645	TaGPAT6 enhances salt tolerance in wheat by synthesizing cutin and suberinmonomers to form adiffusion barrier
CQ.Regalona.r1.3BG0003970	TaSGT1	XP_044357108.1	Triticum aestivum	40680787	TaSGT1 increased salt stress tolerance.
CQ.Regalona.r1.1AG0008730	CibZIP43	XP_042981353.1	Carya illinoinensis	40676503	CibZIP43 positively regulates salt and heat tolerance in pecan.
CQ.Regalona.r1.6BG0005030	SGAM1	AT1G60770	Arabidopsis thaliana	40633123	sgam1 mutations suppress the salt sensitivity of mns1 mns2 mutants.
CQ.Regalona.r1.7AG0007480	MNS2	AT3G21160	Arabidopsis thaliana	40633123	sgam1 mutations suppress the salt sensitivity of mns1 mns2 mutants.